Gene Synpcc7942_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1676 
Symbol 
ID3775748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1744816 
End bp1745469 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content59% 
IMG OID637800114 
Producthypothetical protein 
Protein accessionYP_400693 
Protein GI81300485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.662344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.751432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTG CCCTCGATCC TCAGCAATTG ATTCAGCTGC CTGTGATGGG TGCGCTGCTC 
CGGCGAGCTG TCAGTGATGG TATTCGCTGG GCCGATCGCC TAATGGCTGA AGCCGCGGAT
CCCAGTGATC GCCAGCAACT CTGCGATCGA GTTATTACCA ATAGCGCCTT GCGAACAGCC
GGTTGGAGCA CGATCGCTGG CTTGGGTGGC CCACTGACCT TACTGGCTGG CTTGTCGTTT
GATGCAGGCC AAACCCTCTA CGGCCAAGTG AGGTTGGCGG CGGCGCTATT CCGTATCCAT
GGCGTCGAGC TGGACGATCG CCGGCATTTA CCGCTGTTGA TGGCTGCTGC CGCTGGCATT
GGGGTCGCAG AACTTGCGGC GCTGATTGGA AGTCAGTTGA TGCGTAACGC CATTCACCAA
GTTCTGGGCC AGTTGTCGAA AGCGGCGATG GAACAAACCT TGACGACGCT GGGCAGTCGT
CTACTGGCAC GGGCGGCTGC CTCCTCTGTA TCTAGCTTGA TTCCGGTGGC TGGGGCGATC
GCCAGTGGCG GTGTCAGCGC AGCCTTGATG GTGGCCAGCG GCCGCAATAT CCGCAATTTC
CTCAGTGATT ACGCCAGCCT GCAGATGGTC ACCGTTGAAG TAATCGAAAG CTGA
 
Protein sequence
MAAALDPQQL IQLPVMGALL RRAVSDGIRW ADRLMAEAAD PSDRQQLCDR VITNSALRTA 
GWSTIAGLGG PLTLLAGLSF DAGQTLYGQV RLAAALFRIH GVELDDRRHL PLLMAAAAGI
GVAELAALIG SQLMRNAIHQ VLGQLSKAAM EQTLTTLGSR LLARAAASSV SSLIPVAGAI
ASGGVSAALM VASGRNIRNF LSDYASLQMV TVEVIES