Gene Synpcc7942_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1659 
Symbol 
ID3775730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1729384 
End bp1730031 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content55% 
IMG OID637800096 
Productnitroreductase 
Protein accessionYP_400676 
Protein GI81300468 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.993555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTG TTGCTAACAC GTTGCTCGAT GCCTTGAATT GGCGCTACGC CGTCAAAGCT 
TTTGATCCCG ATCGCAAAAT TCCTGCTGAA ACTTGGGAAG TTCTTCAGCA AGCGCTTATA
CTGACACCCT CTTCTTATGG GCTGCAACCT TGGAAAATTA TCCAAGTGGA GTCTCCTGAG
CTGCGATCGC AACTGCGGGA GCAGTCCTTT AATCAGGGTC AAGTCACCGA TGCATCGCAC
CTAATTGTTT TTCTGGCGCG TACTTCACTG ACGGAAGCCG AAGTCGATCG CCTGATTGAA
CTGACGGCAA CGACGCGATC GGTCGCGGCT GAGAAGCTGG CTGGCTATCG GCAAATGATG
ATCGGCGATC TGGTTCAAGG CCCGCGCCAA GCCGTGATTC AGTACTGGGC CGCGAATCAG
GCTTACATTG CGCTCGGGAA TTTCCTGACG GCTGCTGCCT TGCTGGGCGT TGATACTTGC
CCGCTGGAGG GAATCATCCC AACGGCCTAC GACGAAATCC TGCAGGTCAA AGACAGTGGC
TATCAGACGG TCGTAGCTGC TGTAGCGGGC TATCGGTCGG CCAGCGATGG CTACGCGGAT
TTGGCTAAGG TGCGCTATCC CGCGACAGAG CTGCTGGAAA CCCGCTAG
 
Protein sequence
MSTVANTLLD ALNWRYAVKA FDPDRKIPAE TWEVLQQALI LTPSSYGLQP WKIIQVESPE 
LRSQLREQSF NQGQVTDASH LIVFLARTSL TEAEVDRLIE LTATTRSVAA EKLAGYRQMM
IGDLVQGPRQ AVIQYWAANQ AYIALGNFLT AAALLGVDTC PLEGIIPTAY DEILQVKDSG
YQTVVAAVAG YRSASDGYAD LAKVRYPATE LLETR