Gene Synpcc7942_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1658 
Symbol 
ID3775729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1728788 
End bp1729246 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content57% 
IMG OID637800095 
Producthypothetical protein 
Protein accessionYP_400675 
Protein GI81300467 
COG category[S] Function unknown 
COG ID[COG3556] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.962451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACGA GTGCGATCGT GGCCTATCTG CATTACTTGG GCTTCATGCT CAGCTTTGGG 
GCACTCGTGC TGGAGCGGCG CCTGCTGAAG GCAGAACCCA GCATCAACGA GGCCAAGCTG
ATGATTGGCA CCGATATTGT CTACGGGTTG GCAGCGCTGA CGATTTTGGT GACTGGCGTC
CTGCGCGTTC TCTACTTTGG GCAGGGTGTC AGCTTCTACA TGCACAACCC CGTCTTCCTC
ACTAAAGTCA GCCTCTACCT TGCGATCGGC GGCCTGTCGC TCTATCCCAC GATCAGCTTT
ATTCGCTGGG CTTTTCCCCT GCGTGATGGC AAGGCACCCG TGATCAGCGA AGCTGCTGCT
AAACGCTTGG GCTGGGTGCT GAATATTGAA ATCGCTGCTT TCGTGATTCT GCCGCTGCTG
GCGGCTTTGA TGGCCCGCGG AATCGGTCTG CAAGCTTAA
 
Protein sequence
MVTSAIVAYL HYLGFMLSFG ALVLERRLLK AEPSINEAKL MIGTDIVYGL AALTILVTGV 
LRVLYFGQGV SFYMHNPVFL TKVSLYLAIG GLSLYPTISF IRWAFPLRDG KAPVISEAAA
KRLGWVLNIE IAAFVILPLL AALMARGIGL QA