Gene Synpcc7942_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1649 
Symbol 
ID3775720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1716788 
End bp1717504 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID637800086 
Productrubrerythrin 
Protein accessionYP_400666 
Protein GI81300458 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.429351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCT CCAACCCCAC CACCTTGGCC AACCTCGAAG CTGCCTTCGG GGGTGAATCG 
ATGGCCAACC GCAAGTACCT CTTCTTCGCA GATGTCTGCA AAAAATTGGG TCTCACCGAT
CTCGCCAAAC TCTTCCGAGA AACCGCTAAT CAAGAGACTG AGCATGCCTT CGCCCACTTC
CGTCTGCTCC ACCCAGAACT AGTCGTTGCC AATCCAGAAA GCCTCAGCGA AGAGGAGAAG
AAACAGATTG CAGCTCGCTG TCTGGAACTG GCGATCGAAG GGGAGACCTA CGAGTTCACA
ACGATGTACC CCGAGTTCTA TGCCCAAGCC GTGACGGAGA GAGACGCTAG TGCAGCGGCG
GAATTCAAGG AGCAAGAGGA AGAGTCTCGC GAGCATGCCG GCATCTTCAA AACGGCTGCC
AAAAACTTTG GCCTGCTGAC CCCAATCGAG GAGTACCATG CCAAGCAGTA CGGCGTTGCC
CTGCAAGCCT TAGAAAGTGG CACCGCGAGC AAAGCGCCCG CAGACTCAAA TCCGGCAACT
CAGAAATGGA TTTGCCTGCA ATGCTCTGTC ATTTACGATC CGGCTGAAGG CGATCTGGAC
TCTGGCATTG CACCCGGGAC ACCCTTCGCA GCCATTCCAG AGGATTGGTC TTGCCCGATC
TGCGGAGTGA CGAAAAAGAG TTTTGTTCCC TACCAAGAGC CCGCGATCGC TGCTTAA
 
Protein sequence
MDLSNPTTLA NLEAAFGGES MANRKYLFFA DVCKKLGLTD LAKLFRETAN QETEHAFAHF 
RLLHPELVVA NPESLSEEEK KQIAARCLEL AIEGETYEFT TMYPEFYAQA VTERDASAAA
EFKEQEEESR EHAGIFKTAA KNFGLLTPIE EYHAKQYGVA LQALESGTAS KAPADSNPAT
QKWICLQCSV IYDPAEGDLD SGIAPGTPFA AIPEDWSCPI CGVTKKSFVP YQEPAIAA