Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1649 |
Symbol | |
ID | 3775720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1716788 |
End bp | 1717504 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637800086 |
Product | rubrerythrin |
Protein accession | YP_400666 |
Protein GI | 81300458 |
COG category | [C] Energy production and conversion |
COG ID | [COG1592] Rubrerythrin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.429351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCTCT CCAACCCCAC CACCTTGGCC AACCTCGAAG CTGCCTTCGG GGGTGAATCG ATGGCCAACC GCAAGTACCT CTTCTTCGCA GATGTCTGCA AAAAATTGGG TCTCACCGAT CTCGCCAAAC TCTTCCGAGA AACCGCTAAT CAAGAGACTG AGCATGCCTT CGCCCACTTC CGTCTGCTCC ACCCAGAACT AGTCGTTGCC AATCCAGAAA GCCTCAGCGA AGAGGAGAAG AAACAGATTG CAGCTCGCTG TCTGGAACTG GCGATCGAAG GGGAGACCTA CGAGTTCACA ACGATGTACC CCGAGTTCTA TGCCCAAGCC GTGACGGAGA GAGACGCTAG TGCAGCGGCG GAATTCAAGG AGCAAGAGGA AGAGTCTCGC GAGCATGCCG GCATCTTCAA AACGGCTGCC AAAAACTTTG GCCTGCTGAC CCCAATCGAG GAGTACCATG CCAAGCAGTA CGGCGTTGCC CTGCAAGCCT TAGAAAGTGG CACCGCGAGC AAAGCGCCCG CAGACTCAAA TCCGGCAACT CAGAAATGGA TTTGCCTGCA ATGCTCTGTC ATTTACGATC CGGCTGAAGG CGATCTGGAC TCTGGCATTG CACCCGGGAC ACCCTTCGCA GCCATTCCAG AGGATTGGTC TTGCCCGATC TGCGGAGTGA CGAAAAAGAG TTTTGTTCCC TACCAAGAGC CCGCGATCGC TGCTTAA
|
Protein sequence | MDLSNPTTLA NLEAAFGGES MANRKYLFFA DVCKKLGLTD LAKLFRETAN QETEHAFAHF RLLHPELVVA NPESLSEEEK KQIAARCLEL AIEGETYEFT TMYPEFYAQA VTERDASAAA EFKEQEEESR EHAGIFKTAA KNFGLLTPIE EYHAKQYGVA LQALESGTAS KAPADSNPAT QKWICLQCSV IYDPAEGDLD SGIAPGTPFA AIPEDWSCPI CGVTKKSFVP YQEPAIAA
|
| |