Gene Synpcc7942_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1648 
Symbol 
ID3775719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1716189 
End bp1716638 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID637800085 
Productferric uptake regulator family protein 
Protein accessionYP_400665 
Protein GI81300457 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.499744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCT CCTCAACGCC CTCGGTCTCT ATCCGCGATC GCTTGCAACA AGCGGGTTTG 
CGGGTAACGC CACAGCGATT TGCGGTCTAT GCAAACCTGC TGGGTCGCCA TGACCATCCC
ACGGTCGAGA CAATCCTGCA GGACATCAAT CAAGAGTTGC CGATGGCGTC TAAGGCCGCT
GTTTATGGCG CACTTTCGGT ACTACGCGAA GTTGGCCTAA TTCGGGAAGT GCTGCTCGAT
GAAGGGATTA CCCGCTACGA CGCGCGCACG GAGCCACACC ATCACTGCCG CTGTGAGAGT
TGTGGGGGGA TTCAAGACTT GGACTGGACA GCGATCGCCC CGATTGATCT CAGTGCTGTG
CCCGCAGGCT TTCGTCCCGA TCGCTATGAG GTCACGATTT TAGGCCAATG TGCGGCTTGT
GCTACATCCA TTCGCAAGCC TAAAAACTAG
 
Protein sequence
MSASSTPSVS IRDRLQQAGL RVTPQRFAVY ANLLGRHDHP TVETILQDIN QELPMASKAA 
VYGALSVLRE VGLIREVLLD EGITRYDART EPHHHCRCES CGGIQDLDWT AIAPIDLSAV
PAGFRPDRYE VTILGQCAAC ATSIRKPKN