| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1647 |
|---|
| Symbol | |
|---|
| ID | 3775718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1715266 |
|---|
| End bp | 1716186 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637800084 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400664 |
|---|
| Protein GI | 81300456 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4814] Uncharacterized protein with an alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.559763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGG CTCGGACGAC CACCGTGGAT CACCCCGATC GTGAGACCCC TTTTCTCCTC
TTTGCCCAAC ATGGCTGGGA CGATCGCTCG TACCCCATTC AGCAGATGGC CCAGAGCATC
GCGCCGCAGT ACTCGCAGGT CTACGCGCCG AATTTAGGGC GATTCCGCAC TTGGATTGCG
ATCGAACCTC TGATCCAGAG TGTGGAAGCA GTCGTTCTCG AGGCGATCGC GCAATATCCG
GATCGGCCCC TGCGTTTCCT AGGGCATTCC ATGGGTGGGT TGATTTGGCT GGAAGTTCTC
AGCCGTCATC GTGAGTGGTG GGACCGCACC CATAGCTTGG TGCTAGTTGG GTCGCCAGTC
AGTGGTTCAG ATGTCTGTCG ATTGCTCGAC CCCTTCGGTC GATTGCCGAG TATTGCCAAG
GATTTAGGGC GAAACCGTCG TCCTTTGGCT GAAGCGATCG CGGCTCAAAT CCCCACGGCT
TCAATCGTCA GTGACCTAGG CGACTATAGT GATGGCCTCG TGCCAGTCAA CAGTTCAGAG
TTTGAGCGAG CCACGCTGGT TACGCTGAAA GATATTTCCC ACGCGCGCCT GAAATCCCAT
CCTCAAGTCG CTGATGCGAT CGCTCAATTC TGGAAACAGC CCTCGATTGC GCCCCGTCCT
CGCGATCGCG CTGGTACCCT CATCGCTCAA CTCCGCAGCC TTAATCTCAC CGAGTGCAAC
CACCGGAACT TTGCTAAGGC AGCGGTGCTG AAGAGCCAAC CCGACGGGGT CAAAATTTGG
CGCTGGCTGA ATCCGCTGCG GGTACAACAT ATTTTTGTCA GTAGCCCAGA TCCTGCAACG
GGCCGTGATT GCTGTCGCTA CGCTGCCTAT ACTGGCTGGC TCGACGATGC GGCGCTCTCG
AAATTCCTGG AAAAACTCTA A
|
|---|
| Protein sequence | MDQARTTTVD HPDRETPFLL FAQHGWDDRS YPIQQMAQSI APQYSQVYAP NLGRFRTWIA
IEPLIQSVEA VVLEAIAQYP DRPLRFLGHS MGGLIWLEVL SRHREWWDRT HSLVLVGSPV
SGSDVCRLLD PFGRLPSIAK DLGRNRRPLA EAIAAQIPTA SIVSDLGDYS DGLVPVNSSE
FERATLVTLK DISHARLKSH PQVADAIAQF WKQPSIAPRP RDRAGTLIAQ LRSLNLTECN
HRNFAKAAVL KSQPDGVKIW RWLNPLRVQH IFVSSPDPAT GRDCCRYAAY TGWLDDAALS
KFLEKL
|
|---|
| |