Gene Synpcc7942_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1646 
Symbol 
ID3775717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1714348 
End bp1715070 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID637800083 
Producthypothetical protein 
Protein accessionYP_400663 
Protein GI81300455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.895919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGG CTCTGGCATG CTTTGGTCTG GCACTAATGG TGAATACTGG TCTGGCTCTA 
CCTCTCCAAG CCAGACCTGG GGGTTGGGGG CGACCAGACT TTAGTCGGCC GATCGATCGC
CCCGCTGACT TTCCAGATCG TCCAGTCGAA CAACCGAACT GGCAACGCGA TAACTTTGAT
AGACCGGTAG ATCAGCCCAA TTGGCAACGC GATAATTTCG ATCGTCCTGT GATTAATCAG
CCAGTCTACA ACCGACCGAT TAATTCTGGA AACGTCATTA TTAATAATCG CCCAGTTAAT
ATCAATAACA TCAATACTCG TCCAGCCTGG GTAAACAACA ATTGGGTCGC TGCACGGCCC
TGGGGCGGCT ACGGTTGGTA CGGTGGTTGG AGCAGTCCAC CTTGGGGTTG GTGGGGGGCT
AACGCTGCTG TTTGGGGGGT CACAACTCTC ACGAGTGCTG CGATTATTGG CAGCTCGATA
GACAATGCGA TCAGCAGCAA CGTGACCTAC GTTTCAGTGC CCAACAGTGC TTACACGCTT
TATTACGGAA CGGTTGCTCC TATCAATAGC AGTCAAGTCA AATTTGCCTT TGGCTACCAA
GGACAAACCT ATCAAGCAGT AGCCGATTGC CAGCAGGGCT TCCTGAATGG GCAGCCCCCT
TCAACTCCTG CTGATGCTGA ATTGATGAAT TCTGCCTGCC AAGTCGCTTT TGCTAGCTTC
TAA
 
Protein sequence
MKTALACFGL ALMVNTGLAL PLQARPGGWG RPDFSRPIDR PADFPDRPVE QPNWQRDNFD 
RPVDQPNWQR DNFDRPVINQ PVYNRPINSG NVIINNRPVN INNINTRPAW VNNNWVAARP
WGGYGWYGGW SSPPWGWWGA NAAVWGVTTL TSAAIIGSSI DNAISSNVTY VSVPNSAYTL
YYGTVAPINS SQVKFAFGYQ GQTYQAVADC QQGFLNGQPP STPADAELMN SACQVAFASF