| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1643 |
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| Symbol | |
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| ID | 3775713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1710353 |
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| End bp | 1711873 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637800080 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_400660 |
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| Protein GI | 81300452 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.65001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGT GTATTCCTAC CCGTTTTGAA GAGCAGCGTC TGGCAGCGCT CTATCGCTAT
GGCATCCTTG ATACGCCGCC CGAGCAACAT TTTGATGACC TGACGCAGTT GATTGCGGCG
ATTTGTGAGG TACCGATCGC TTTGATCAGC TTGATTGATC GCGATCGCCA ATGGTTTAAA
TCCAGAGTTG GCCTCGAGGA TGACTCCAGC CCGCGCTCCA CATCATTTTG TGGCCACGCG
ATTCAGCAAG AAGATTTATT CATCGTGGAA GACGCCAAGG CTGATCCTCG CTTTGTCGAC
AATCCCTTCG TAACCCAGGA GCCCCATATT CGCTTCTATG CGGGGTCTCC TTTGATCACG
GATGACGAAC AAATTCTCGG AACCCTCTGT GTCATTGACC GCAAACCCCG TCATCTGAAT
GACCTGCAAC AGCAAGCCCT CAGAATCCTC AGCCGCCAGG TGATTCGTGA GCTGGAATTG
CGGCGATCGC TCTATCAAGC GGAGCATCGC TGGAGCCTGG CACGCTTTAA GCGGCGGCTG
GGCAATTTGG TGCGAAGCAG TTTGGATCTC GATCAAATTT GCCAACTTGC TGCGCAGGAA
TTGGGTGAAA CCCTAGAAAT TGATCACTGC TCAATCAGCA CTTGTACGGA TGCTTCAACC
ATCTGTTCGA TGTCGCATTA CGTGCGGCCC GAGCAAATCC ATCGTTCCAT CCAATGGCAG
TTACCCGATG CGTTAGTCCA GCAGGCTTTA CAACAAGACA ATGCGATCAC TTTTGACCAA
TATCAGTCCG AGGTGATTCC GACTGTAGAG CCTCCCCAAT CACTGCTACT GGTGCGAACC
TCCGCCCAAG ATCGCCCGAA TGGCTTAATC AGCTTGGCTC ACTACAGCAG CCATCATCAC
TGGAATCGTG ATGAGATTGA TCTCTTGGAA TCGGTTGCGG TTCAGTTGGG GCTCGCGATT
GAACAAGCCC AGCTCTATCG GTCCGTTCAA GCCGTCAATG TTGAGCTGCA TAAGCTGGCC
TACACCGACA CACTGACTCA AATTCCTAAT CGTCGGGCGT TTGATGAAAC CTTTGCCGAA
CTCTGGCAAA CGGCATTACT CCAGCAACAG TCACTTTCGC TGATTGTGGC AGACATCGAT
TTGTTCAAAA CTGTCAACGA TCGCTTTGGC TATGAACAGG GTGATCGCTG TCTAAAACAT
GTTGCCCAAA CTCTCAAAAC TGGCATCCGC CAGAATCAAG ATTTTGTTGC TCGCTTCGGC
GGTGAAGAGT TCGTCTTGCT GCTCCCTAGT ACGGATTCTT CTGGAGCGAT CGCTGTTGTG
GCTAAGCTCC AAGAGCGCTT GGCCAATAGC GAGGCAGACT TACCAGTCTT GCCAACTCTC
AGCTATGGCA TTGCCACAGT GATTCCGCAG CCCCAACACA CACCCGAGCA ATTATTCCGA
GTGGCCAATC AAGCAGTGCG CCGCGTCAAA GAACGGGGTC GCAATGATTT TGCAGCACGG
TTATTAGTTG CTGCCGAGTG A
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| Protein sequence | MLQCIPTRFE EQRLAALYRY GILDTPPEQH FDDLTQLIAA ICEVPIALIS LIDRDRQWFK
SRVGLEDDSS PRSTSFCGHA IQQEDLFIVE DAKADPRFVD NPFVTQEPHI RFYAGSPLIT
DDEQILGTLC VIDRKPRHLN DLQQQALRIL SRQVIRELEL RRSLYQAEHR WSLARFKRRL
GNLVRSSLDL DQICQLAAQE LGETLEIDHC SISTCTDAST ICSMSHYVRP EQIHRSIQWQ
LPDALVQQAL QQDNAITFDQ YQSEVIPTVE PPQSLLLVRT SAQDRPNGLI SLAHYSSHHH
WNRDEIDLLE SVAVQLGLAI EQAQLYRSVQ AVNVELHKLA YTDTLTQIPN RRAFDETFAE
LWQTALLQQQ SLSLIVADID LFKTVNDRFG YEQGDRCLKH VAQTLKTGIR QNQDFVARFG
GEEFVLLLPS TDSSGAIAVV AKLQERLANS EADLPVLPTL SYGIATVIPQ PQHTPEQLFR
VANQAVRRVK ERGRNDFAAR LLVAAE
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