| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1642 |
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| Symbol | |
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| ID | 3775712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1709180 |
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| End bp | 1710250 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637800079 |
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| Product | hypothetical protein |
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| Protein accession | YP_400659 |
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| Protein GI | 81300451 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1808] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00271] uncharacterized hydrophobic domain
[TIGR00341] conserved hypothetical protein TIGR00341 |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.592857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGT CCTTTGGTGC CCGGCGGCAA TTGATTCGGC AGCGTCGACG AGTTCAGGAT
GCTGTCCAAC GTAATAGTGG CCGCTGGAAG TGGATAGGTG GCAGGCCCGT CAGTCTCCCC
GTCTTGAACC GCAGTCTTTG GAAAATTGCT GAGCCAACTT CCGACTACTA TCTGTTGCTG
CTCTTGTCGG GTTCAATCGC CAGTTTTGGC CTCTTAGCAA ACAGTGCGGC GACGATTATT
GGGGCGATGA TTGTTGCGCC ACTAATGGGT CCCATTTTGG CGATCGGCTA TGCGATCGTG
GCAGGGAACC GACGCTTGCT CAAGCGATCG CTCCTCGCTT TGAGCACAGG TGCTCTACTC
ACTGTGACGG TTGCCGTCAT CATCGGCGGC ATCTTAGGCA GTATCGATCC AGGCTCTGAA
ATCATGGGTC GCACCCAGCC CACGTTGCTG GACTTGGGGG TTGCTTTGGC AGCGGGAGCG
ACTGGTGCCC TTGCCCAATG TCGGCGCGAT ATTGCCAATA CACTGCCTGG AGTCGCGATC
GCGGTGGCCT TGGTACCGCC GCTGAGCGTG GTGGGGTTAG GTTTGGCCCT TGGTTCTCTC
CCCATTGCCG GCGGCTCCTT CCTGTTATTC CTCACCAACT TGGTAGGGAT TATTTTGGCA
AGCAGTGGGG TTTTTCTCTG GCAGAACTAC GGCACCTTTA CCCGCGCTCG GCAGGGTTTG
ATGGCTGCAG TGCTTGCGAT GTTCACCCTG ACTATTCCCT TGGGCCTTTC ACTGCAAGCA
GCTGTTCGCC GGGCCCAAGT AGTGACGGTT GCAGAAGATG TTTTGCGCAG TCGTTATAGC
GCTGTGACAG GCGTCCGCCT CCGGGACATC CGAGTCCAGT TGCAAGGGCA GACTACCCAT
CTTGAAATTG CATTAGAGGC GCCACCTGAT GTGATCTCAG CAAATTTAGT GGATGACATC
CGCCAGCAGA TGGAGACTCG CTTACGGAGC CCCGTCAGTT TAGATGTGCG CCTTTTATTA
ATTGAACAGT TTCAATCCAA TAAGAGCATC TCTCCCTCAA ACAGACGGTA A
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| Protein sequence | MKLSFGARRQ LIRQRRRVQD AVQRNSGRWK WIGGRPVSLP VLNRSLWKIA EPTSDYYLLL
LLSGSIASFG LLANSAATII GAMIVAPLMG PILAIGYAIV AGNRRLLKRS LLALSTGALL
TVTVAVIIGG ILGSIDPGSE IMGRTQPTLL DLGVALAAGA TGALAQCRRD IANTLPGVAI
AVALVPPLSV VGLGLALGSL PIAGGSFLLF LTNLVGIILA SSGVFLWQNY GTFTRARQGL
MAAVLAMFTL TIPLGLSLQA AVRRAQVVTV AEDVLRSRYS AVTGVRLRDI RVQLQGQTTH
LEIALEAPPD VISANLVDDI RQQMETRLRS PVSLDVRLLL IEQFQSNKSI SPSNRR
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