Gene Synpcc7942_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1639 
Symbol 
ID3775709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1707135 
End bp1707776 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID637800076 
ProductATPase 
Protein accessionYP_400656 
Protein GI81300448 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.698343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATCGC TCAGTTTTGG CTGGTCGCCC GACTCGTTCA TCCTCCAGGA TTGCGATCTC 
CAAATTCCCC GGGGCGAGTT CTGGATGCTG TTGGGGGATA ACGGCAGTGG TAAATCAACG
CTGCTGCGCC TGATTGCTGG ACTGTTGCCG CTGCAATCCG GCACGATCGC CTGCGATCGC
CCCTTGGGGT TTGTCTTTCA GAATCCCGAT CATCAATTGG TGATGCCTAC TGTCGGGGCG
GATGTAGCCT TTGGATTAGT CGAAGAGGGT CTGTCGGTCA CTCAAGCTCA AGAGCGTGTG
GCTGAAGCCC TAGCAGCCGT CCGGCTAGCA CATTACGAAA GGCGGCCGAT CTATGCCTTG
AGTGGTGGTC AAAAGCAACG GGTGGCGATC GCTGGTGCGA TCGCTCGCCA CTGTGAATTA
CTCCTGTTTG ACGAACCCAC CGCGCTCTTG GATAGCGACA GTCAGCGCGA CTTAGTTCAG
CAAGTTCAAC AATTAGTGCG CGATCGCGGT TTGACAGCTC TCTGGGTTAC TCACCGGCTC
GAAGAACTCG AAGCCGCCGA TGGGGCTTGT CTCTTGCAAC AGGGGCGAGT TGTAGCGACA
GGATCTGTAG AAACGGTAAA AGCCTGTCTC AACCAGCTCT GA
 
Protein sequence
MRSLSFGWSP DSFILQDCDL QIPRGEFWML LGDNGSGKST LLRLIAGLLP LQSGTIACDR 
PLGFVFQNPD HQLVMPTVGA DVAFGLVEEG LSVTQAQERV AEALAAVRLA HYERRPIYAL
SGGQKQRVAI AGAIARHCEL LLFDEPTALL DSDSQRDLVQ QVQQLVRDRG LTALWVTHRL
EELEAADGAC LLQQGRVVAT GSVETVKACL NQL