Gene Synpcc7942_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1632 
Symbol 
ID3775701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1700263 
End bp1700772 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content50% 
IMG OID637800068 
Producthypothetical protein 
Protein accessionYP_400649 
Protein GI81300441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.773088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.201764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTTC CGACCCTGAG CACCCTGAAA ACAGCGGTGC TCCTGCTTCC TTTGGCAATT 
CCAACGGCTG CTCTTGCCCT ACCTCAAACC GCTGTTTGGC GACTGGCTGA TGCTCAAAAT
CATCAGCACC AGAATCATCA ACATCAAAGC GGGGCTGGCC ATTCCCATGG CAGCTTGGCG
GTGCCAACAG GCACTCCACA ACCGACTGTC AATTTAGTGG TTGAACGCGA CCGCAAAAGT
GGTTGGAATC TCCGGCTAAC TACCACTAAC TTCCAGTTTG CCCCCGAGGA ACTTGACAAA
ACAAATCGAG TTGATTCCGG GCATGCCCAT TTGTTCCTTA ATGGGAAAAA GATTGCGAGA
CTTTACGGAC CTTGGTATCA CTTGGCTTCG CTCCCAGCCG GGAAGCAGAC TCTCATGGTG
GAATTGACCA GCAATCAACA CAATGTAATT ACGGTTAATG GTCAACCTGT CATTGCCAAA
GTGACTGTAG ACGTTCCAGC GATGAAGTAA
 
Protein sequence
MMLPTLSTLK TAVLLLPLAI PTAALALPQT AVWRLADAQN HQHQNHQHQS GAGHSHGSLA 
VPTGTPQPTV NLVVERDRKS GWNLRLTTTN FQFAPEELDK TNRVDSGHAH LFLNGKKIAR
LYGPWYHLAS LPAGKQTLMV ELTSNQHNVI TVNGQPVIAK VTVDVPAMK