Gene Synpcc7942_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1621 
Symbol 
ID3775690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1687584 
End bp1689152 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content56% 
IMG OID637800057 
ProductElongator protein 3/MiaB/NifB 
Protein accessionYP_400638 
Protein GI81300430 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0718144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTT TACTGATTTA TCCTCGCTTT CCCAAAACGT TCTGGTCCTA CGAAAAAATT 
CTGGAACTCG TCAATCGGAA AGTGTTGTTA CCGCCGCTGG GGTTGGTGAC TGTCGCCGCC
ATCCTGCCGC AGGAATGGGA ATTTAAGTTG GTTGACCGCA ATATCCGCGC CGTCACTGAA
GAAGAGTGGG CTTGGGCCGA CATTGTGATT TTGTCGGCCA TGATTGTCCA GAAAGAGGAC
ATGGTCGATC AGATTTCCCT TGCGAAGCAG CATGGCAAGC GCGTTGCTGT TGGAGGCCCC
TACCCCACCT CAGTGCCCGA GGAAATGGAA GCAGCTGGCG TTGACTTCCT GATCCTTGAC
GAGGGCGAAA TCACGCTGCC GATGTTTGTT GAAGCCTTGG AACGAGGCGA GACTCAGGGT
CGCTTTAGCT CCAATGGCGA AAAACCGGAT GTGACGACCA CGCCGATTCC GCGCTACGAC
CTGCTAGAGC GCAGTGCCTA CGACTCGATG TCGGTGCAGT TCTCGCGGGG TTGCCCGTTC
CAGTGCGAGT TCTGCGACAT CATCGTGCTC TACGGTCGCA AACCCCGCAC CAAGGAGCCA
CAGCAACTGC TGGCAGAACT GCAGGCGCTC TATGACCTTG GCTGGCGCGG CGGCGTGTTT
ATGGTCGATG ACAACTTCAT TGGTAATAAG CGCAATGTCA AACGGTTGCT GCAAGACCTG
AAAGTTTGGC AGTCCGAGCG TGGCTACCCC TTCCGCTTTG ATACGGAAGC GTCCCTGGAC
TTGGCTGATG ACGATGAGCT GATCGAGTTG ATGCTCGACT GCAACTTCGC GGCGGTGTTT
ATGGGTATCG AAACACCTGA CACCGACAGT CTGCAGCTGA CCAAGAAGTT TCAAAACACG
CGATCGCCGC TACTGGAGTC GATCGATAAG GTGACGCGAT CGGGCCTGCG AGTGATTGCT
GGCTTCATCA TCGGCTTCGA TGGCGAGAAA CCGGGTGCAG GTCAGCGCAT CGTCGATTTT
GCCGAAGTGA CGGGCATTCC CACGACCACC TTTGCCATGC TGCAAGCACT CCCCAATACG
GCGCTCTGGC ATCGTCTGGA AAAAGAAGGT CGTCTACGGC TACCGGATGC CAACATCAAC
CAGACAACGT TGATGAACTT TGTGCCCACC CGTCCGGTCG AAGATATTGC TCGTGAATAT
ATTGATGCCT TCGGGAAGCT CTACGAGCCG GTGCAATACC TGAATCGGGT TTATCGATAC
TTCCTCAAGC TGGGCGCGCC TCGGGTACAA CCCAAGTTTC AGTGGCCGGA ATGGGTGGTC
GTGCGGGCAC TATTACTAGT CTGCTGGCGT CAAGGCGTGG TTCGCAAAAC CCGCTGGCTG
TTCTGGCATC ACCTGTTCAG CATTCTGCGT CGCAATCCAG CAGTGGCAGA ACAGTACATC
GCTGTCTGTG CCCATAATGA GCACTTCATG GAGTACCGCG AGATCGTCCG CAACCAGATT
GAAGCGCAAC TCCAAGCCTA CTTGGAGCAG GCAGAACGTC ACGCCCCAGA AACGGCGATC
GCGGCTTAG
 
Protein sequence
MRALLIYPRF PKTFWSYEKI LELVNRKVLL PPLGLVTVAA ILPQEWEFKL VDRNIRAVTE 
EEWAWADIVI LSAMIVQKED MVDQISLAKQ HGKRVAVGGP YPTSVPEEME AAGVDFLILD
EGEITLPMFV EALERGETQG RFSSNGEKPD VTTTPIPRYD LLERSAYDSM SVQFSRGCPF
QCEFCDIIVL YGRKPRTKEP QQLLAELQAL YDLGWRGGVF MVDDNFIGNK RNVKRLLQDL
KVWQSERGYP FRFDTEASLD LADDDELIEL MLDCNFAAVF MGIETPDTDS LQLTKKFQNT
RSPLLESIDK VTRSGLRVIA GFIIGFDGEK PGAGQRIVDF AEVTGIPTTT FAMLQALPNT
ALWHRLEKEG RLRLPDANIN QTTLMNFVPT RPVEDIAREY IDAFGKLYEP VQYLNRVYRY
FLKLGAPRVQ PKFQWPEWVV VRALLLVCWR QGVVRKTRWL FWHHLFSILR RNPAVAEQYI
AVCAHNEHFM EYREIVRNQI EAQLQAYLEQ AERHAPETAI AA