Gene Synpcc7942_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1618 
Symbol 
ID3775687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1684927 
End bp1685433 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content58% 
IMG OID637800054 
Productsingle-stranded nucleic acid binding R3H 
Protein accessionYP_400635 
Protein GI81300427 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.122572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG AGCTCGCGCT GAATCAAGGA CAAGCTTGGC TAACTGAAAC ACTGCAACTG 
ATGGGATGTC CGGTTGCAGT CTCGGCCGAA TTGCGGACAG AGGCAGTTCG GCCCGACCCC
GAAGGCTGGT TGGAGCTGGA TCCGGAAGGT GAGCTCTTGC CAGAGCGAGC AGCCGCCTTA
ATTGGCGATC GCGGGGTAGC GATCGATGCC TTGCAGTTCT TGGCTAACCT GGCTCTCAAT
CAGCATCGAG CAGCGGACGA TCACCTCCAT TTCACCTTGG AGCTGGGGGG CTACCGGCAG
CAACGTCGGC AACTCTTGAG TCAAATCGCT ATCCAAGTAG CCGATCGTGT CTTGAGTTCT
GGGGAACCAG AAAAGCTGGA GGACTATTCC TCCGCCGATC GCCGAGTGCT GCATGAGCTG
TTTGAGGCTT ATCCTCACCT GCAGGCCGTG AGTGAAGGGC GGGAACCCCA TCGATCGCTG
CTGATCAGCC GTCGCGCTGA GGAATAA
 
Protein sequence
MTHELALNQG QAWLTETLQL MGCPVAVSAE LRTEAVRPDP EGWLELDPEG ELLPERAAAL 
IGDRGVAIDA LQFLANLALN QHRAADDHLH FTLELGGYRQ QRRQLLSQIA IQVADRVLSS
GEPEKLEDYS SADRRVLHEL FEAYPHLQAV SEGREPHRSL LISRRAEE