Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1618 |
Symbol | |
ID | 3775687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1684927 |
End bp | 1685433 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637800054 |
Product | single-stranded nucleic acid binding R3H |
Protein accession | YP_400635 |
Protein GI | 81300427 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.122572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACG AGCTCGCGCT GAATCAAGGA CAAGCTTGGC TAACTGAAAC ACTGCAACTG ATGGGATGTC CGGTTGCAGT CTCGGCCGAA TTGCGGACAG AGGCAGTTCG GCCCGACCCC GAAGGCTGGT TGGAGCTGGA TCCGGAAGGT GAGCTCTTGC CAGAGCGAGC AGCCGCCTTA ATTGGCGATC GCGGGGTAGC GATCGATGCC TTGCAGTTCT TGGCTAACCT GGCTCTCAAT CAGCATCGAG CAGCGGACGA TCACCTCCAT TTCACCTTGG AGCTGGGGGG CTACCGGCAG CAACGTCGGC AACTCTTGAG TCAAATCGCT ATCCAAGTAG CCGATCGTGT CTTGAGTTCT GGGGAACCAG AAAAGCTGGA GGACTATTCC TCCGCCGATC GCCGAGTGCT GCATGAGCTG TTTGAGGCTT ATCCTCACCT GCAGGCCGTG AGTGAAGGGC GGGAACCCCA TCGATCGCTG CTGATCAGCC GTCGCGCTGA GGAATAA
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Protein sequence | MTHELALNQG QAWLTETLQL MGCPVAVSAE LRTEAVRPDP EGWLELDPEG ELLPERAAAL IGDRGVAIDA LQFLANLALN QHRAADDHLH FTLELGGYRQ QRRQLLSQIA IQVADRVLSS GEPEKLEDYS SADRRVLHEL FEAYPHLQAV SEGREPHRSL LISRRAEE
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