| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1607 |
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| Symbol | |
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| ID | 3775674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1672123 |
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| End bp | 1673679 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637800041 |
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| Product | porin; major outer membrane protein |
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| Protein accession | YP_400624 |
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| Protein GI | 81300416 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.657278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTT TCGTCAAAGC AGGCCTAGTG GTCACTGGTG CCAACCTGCT TGCGATCGCG
CCGGGTCAAG CACTGAGCCT TGATCAGCTC CAAAAAATTG ATGCTGTGAC GCCAGATGGC
ATCACCTCAG GACAAATCAC TTCAGTTAAC GAATTGAGTG ATGTCAAACC AACCGACTGG
GCCTATCAAG CGCTGCAGTC TTTGGTCGAG CGGTATGGCT GCATTGTGGG TTATCCCGAC
CGCACCTTCC GGGGAGCCCG ACCACTCAGT CGCTATGAAT TTGCGGCAGG TCTCAACGCT
TGTCTCGACA AGGTAATTGA GTTTGCTGCT TCCAAAGAAG ATCTCGATAC CCTCAAACGC
CTCACCGAAG AATTTCAAGC AGAACTCGCG ACGCTGCGCG GGCGAGTCGA TGCCTTGGAA
GCCCGCACTA AAGAACTGGA AGCAACTCGA TTCTCCAGCA CGACCAAGCT CCGAGGCGAG
GTCATCTTTG GTCTGGATGC CTTGGCCAAC AGCAACGGTA ATGAGGTCAA CAGCAATGGC
GCTGTCTCCT TCGGCAACAA AGTCGACCTA GACTTAGACA CCAGCTTCAC TGGCAAAGAC
CTCCTGAAAA CAAGGCTGCG CGCCCGCAAC ATTGAGCCAA TTACCAACCG GTTGGCCCCA
GGTTTTAGAG CGCCAGGTTC CGTGCTTGAC TACGGCGGTA ACTCCAACAA CACCTTCTTC
ATCGACAAGC TCTACTACAC TTTCCCCGCC GGCAGCGTTC GCTTCACCGT TGGAACGGTA
GGGGTTGGCG TACAGGAGTA TGGTATGCGC GACGCCACCT TCTCGAGCGG AGCGAATGAA
GGCAAGACGT TTCGCAAAGG CCCTGCCAAC ATCTACGAAA GTAACGGTAA GGCTGGCGTT
GGTTTCGACT GGCGTATCAA CCCGAACTTC AGCTTCCAGT TGGGCTACCT CAACCGAGGT
GCTGACCAAG TGGGCGTAGA TCAGGGCGGT TTCTTTGGAC AAGGAACCGT TGGCACCGCT
AAATCGGGTT GGGATGTGGC AACCCAGTTG CGGTTTGAAA CGGATAACCG CAAATTCCGA
GCGGCATTAG CCTATAGCCT ACGTAACGAT CGCTATGTCA CTGATTTAGG CACAACCCGC
GCTGAGCGCC CCTTCGGTGC AGCCAACTAC AACACCAACA ACCTTGCTCT GACGATGGGC
TGGGCAGTCA GCGATAACTT CACGATTTCG GGTGCGTATG GCATTGGCTT CGCGAATGTC
GCTGGCGGTT CTGACAGTGC CACCATTCAG ACCTGGAATG TCGGTCTGAC CTTCCCTGAT
CTGTTTGCGA AGGGTAATTC TGGCGTGATT ACAGTGGGAC AAATGCCCTA CGTAACCAGT
GCTAGCCAAC AGTCGGCTGA AGACACCGGC TCGTTGGGAT TGGAAGTGAA CTATAAGTTC
CAAGTGACGG ACAATATTTC GATCACGCCT GGGATTTATC TGTTCAACAA TACGAACGGT
CTTGAGAACG GCGGAACCAG CTACGTTCCC TATCTGAGAA CCATCTTCCG CTTCTGA
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| Protein sequence | MNFFVKAGLV VTGANLLAIA PGQALSLDQL QKIDAVTPDG ITSGQITSVN ELSDVKPTDW
AYQALQSLVE RYGCIVGYPD RTFRGARPLS RYEFAAGLNA CLDKVIEFAA SKEDLDTLKR
LTEEFQAELA TLRGRVDALE ARTKELEATR FSSTTKLRGE VIFGLDALAN SNGNEVNSNG
AVSFGNKVDL DLDTSFTGKD LLKTRLRARN IEPITNRLAP GFRAPGSVLD YGGNSNNTFF
IDKLYYTFPA GSVRFTVGTV GVGVQEYGMR DATFSSGANE GKTFRKGPAN IYESNGKAGV
GFDWRINPNF SFQLGYLNRG ADQVGVDQGG FFGQGTVGTA KSGWDVATQL RFETDNRKFR
AALAYSLRND RYVTDLGTTR AERPFGAANY NTNNLALTMG WAVSDNFTIS GAYGIGFANV
AGGSDSATIQ TWNVGLTFPD LFAKGNSGVI TVGQMPYVTS ASQQSAEDTG SLGLEVNYKF
QVTDNISITP GIYLFNNTNG LENGGTSYVP YLRTIFRF
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