Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1606 |
Symbol | |
ID | 3775673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1671451 |
End bp | 1672011 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637800040 |
Product | Beta-Ig-H3/fasciclin |
Protein accession | YP_400623 |
Protein GI | 81300415 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.922484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTCT CTTCTCTATT CAAAGGAGCT CTTGTCTCTA CGCTCGTCCT GAGCCCAATG CTGGGTTTAA TGCCTGCACA GGCAGAAATG AATAAGCCCA ACAAATCATC TACTGAAACC ACAAAAATCA AAACCTCTCA GCAAGCTCAG ACCTCAATTC TGGATATTGC GAAGAGCAAC GAAAATTTCA GCACTTTGGT AGCTGCGATC CAAGCAGCAG GGCTTGAAGA AGTGCTAGCT AGCAACGGTC AATTTACCGT TTTTGCGCCA ACTAACGAAG CATTTGCTAA GCTTCCCCAA GGCCAATTAG AAGAATTGCT CAAGCCAGAA AATAAAGCGC AACTGGTCAG TCTTTTGACC TACCATGTTG TTCCGTCAGC GATCGCTTCA ACTGCAATTC AGCCAGGTAC AATCACGACC GTTGAGGGTC GGAGCTTACA ACTCTCGATC GCGGATAGCA AACTGAAAGT GAATGATGCA ACGGTGCTTG CAACTGATAT TCAAGCCAGT AATGGGGTGA TTCACGTCGT TGATAGCGTA ATTATTCCCA TGGCTCAGTA G
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Protein sequence | MHFSSLFKGA LVSTLVLSPM LGLMPAQAEM NKPNKSSTET TKIKTSQQAQ TSILDIAKSN ENFSTLVAAI QAAGLEEVLA SNGQFTVFAP TNEAFAKLPQ GQLEELLKPE NKAQLVSLLT YHVVPSAIAS TAIQPGTITT VEGRSLQLSI ADSKLKVNDA TVLATDIQAS NGVIHVVDSV IIPMAQ
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