Gene Synpcc7942_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1598 
Symbol 
ID3775022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1664306 
End bp1665100 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content59% 
IMG OID637800031 
Productphenazine biosynthesis PhzC/PhzF protein 
Protein accessionYP_400615 
Protein GI81300407 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.847307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCC CGCTCCTGCA AATTGATGCC TTTACGCAGC AGCCCTATCG GGGCAATCCG 
GCAGCGGTCT GTTTACTGAC TGAGCCGCTG CCGGATACTC AGCTACAGGC GATCGCTGCA
GAGATGAATC TGTCCGAAAC GGCGTTTCTG CTCACGGATC AAACGGCTTG GCAGTTGCGT
TGGTTTACCC CAGCTTGTGA AGTGGATCTC TGTGGCCATG CCACTTTGGC CGCTGCTCAG
GCTCTCCAAG AGTGGGGGCG TGCTCAGCGT GGTCAGACGC TGCGCTTTCA CACCCGCAGT
GGACTTTTGC AAGCCAAGCT CAGCGATCGC GGTATCGAGC TGGATTTTCC CCTGCAGCCA
CCCCAAGGGC TAGAGACCTC GCTGGATTTA GCAGCCGGGA TCGGCGCGCC GGTTGTCGCT
AGCCGAACCA GTGAGCTGGG CTATTGGCTG CTGGAGTTGG CTTCGGTAGA ACAGGTGCGC
ACCTTACAAC CCGATCAAGC GGCGATCGCC CAATGGCCCT GTCAGGCTGT GGTGGTAACC
GCTGCAGCTC AAGCAGGCGA TGATTGTGAT TTCGTCTCGC GCTTCTTTGC GCCACGCTTT
GGCATTCCCG AGGATCCAGT CACCGGTTCT GCGCACTGCC TGCTAGCGCC CTATTGGCAG
GCTAAACTAG GGCGCGACCG CCTCCAAGCT CGGCAATTGT CTGCCCGAGG CGGCGAGCTG
GAAGTGGAAG TCGTGGGCGA TCGCGTTTTT TTACGGGGCT ATGCCGTGAC AGTGTTGCGA
GGAGAGTTGC AATGA
 
Protein sequence
MAIPLLQIDA FTQQPYRGNP AAVCLLTEPL PDTQLQAIAA EMNLSETAFL LTDQTAWQLR 
WFTPACEVDL CGHATLAAAQ ALQEWGRAQR GQTLRFHTRS GLLQAKLSDR GIELDFPLQP
PQGLETSLDL AAGIGAPVVA SRTSELGYWL LELASVEQVR TLQPDQAAIA QWPCQAVVVT
AAAQAGDDCD FVSRFFAPRF GIPEDPVTGS AHCLLAPYWQ AKLGRDRLQA RQLSARGGEL
EVEVVGDRVF LRGYAVTVLR GELQ