Gene Synpcc7942_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1594 
Symbol 
ID3775018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1660735 
End bp1661760 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content56% 
IMG OID637800027 
Producthypothetical protein 
Protein accessionYP_400611 
Protein GI81300403 
COG category[R] General function prediction only 
COG ID[COG5322] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.293919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTC TTATCGGTCA TCTCACCAGT TTGGAGCAGG CCCGCGACGT TTCTCGCAGG 
ATGGGCTACG ACGAATACGC CGATCAAGGA TTGGAGTTTT GGAGTAGCGC TCCTCCTCAA
ATCGTTGATG AAATCACAGT CACCAGTGCC ACAGGCAAGG TGATTCACGG TCGCTACATC
GAATCGTGTT TCTTGCCGGA AATGCTGGCG GCGCGCCGCT TCAAAACAGC CACGCGCAAA
GTTCTCAATG CCATGTCCCA TGCCCAAAAA CACGGCATCG ACATCTCGGC CTTGGGGGGC
TTTACCTCGA TTATTTTCGA GAATTTCGAT TTGGCCAGTT TGCGGCAAGT GCGCGACACT
ACCTTGGAGT TTGAACGGTT CACCACCGGC AATACTCACA CGGCCTACGT AATCTGTAGA
CAGGTGGAAG CCGCTGCTAA AACGCTGGGC ATCGACATTA CCCAAGCGAC AGTAGCGGTT
GTCGGCGCGA CTGGCGATAT CGGTAGCGCT GTCTGCCGCT GGCTCGACCT CAAACTGGGT
GTCGGTGATT TGATCCTGAC GGCGCGCAAT CAGGAGCGTT TGGATAACCT GCAGGCTGAA
CTCGGCCGGG GCAAGATTCT GCCCTTGGAA GCCGCTCTGC CGGAAGCTGA CTTTATCGTG
TGGGTCGCCA GTATGCCTCA GGGCGTAGTG ATCGACCCAG CAACCCTGAA GCAACCCTGC
GTCCTAATCG ACGGGGGCTA CCCCAAAAAC TTGGGCAGCA AAGTCCAAGG TGAGGGCATC
TATGTCCTCA ATGGCGGGGT AGTTGAACAT TGCTTCGACA TCGACTGGCA GATCATGTCC
GCTGCAGAGA TGGCGCGGCC CGAGCGCCAG ATGTTTGCCT GCTTTGCCGA GGCGATGCTC
TTGGAATTTG AAGGCTGGCA TACTAACTTC TCCTGGGGCC GCAACCAAAT CACGATCGAG
AAGATGGAAG CGATCGGTGA GGCATCGGTG CGCCACGGCT TCCAACCCTT GGCATTGGCA
ATTTGA
 
Protein sequence
MFGLIGHLTS LEQARDVSRR MGYDEYADQG LEFWSSAPPQ IVDEITVTSA TGKVIHGRYI 
ESCFLPEMLA ARRFKTATRK VLNAMSHAQK HGIDISALGG FTSIIFENFD LASLRQVRDT
TLEFERFTTG NTHTAYVICR QVEAAAKTLG IDITQATVAV VGATGDIGSA VCRWLDLKLG
VGDLILTARN QERLDNLQAE LGRGKILPLE AALPEADFIV WVASMPQGVV IDPATLKQPC
VLIDGGYPKN LGSKVQGEGI YVLNGGVVEH CFDIDWQIMS AAEMARPERQ MFACFAEAML
LEFEGWHTNF SWGRNQITIE KMEAIGEASV RHGFQPLALA I