Gene Synpcc7942_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1593 
Symbol 
ID3775017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1660025 
End bp1660720 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content54% 
IMG OID637800026 
Producthypothetical protein 
Protein accessionYP_400610 
Protein GI81300402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.286358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGC TTGAAGCCAG CCTTGAACTG GACTTTCAAA GCGAGTCCTA CAAAGACGCT 
TACAGCCGCA TCAACGCGAT CGTGATTGAA GGCGAACAAG AGGCGTTCGA CAACTACAAT
CGCCTTGCTG AGATGCTGCC CGACCAGCGG GATGAGCTTC ACAAGCTAGC CAAGATGGAA
CAGCGCCACA TGAAAGGCTT TATGGCCTGT GGCAAAAATC TCTCCGTCAC TCCTGACATG
GGTTTTGCCC AGAAATTTTT CGAGCGCTTG CACGAGAACT TCAAAGCGGC GGCTGCGGAA
GGCAAGGTCG TCACCTGCCT ACTGATTCAA TCGCTAATCA TCGAGTGCTT TGCGATCGCG
GCTTACAACA TCTACATCCC AGTGGCGGAT GCTTTTGCCC GCAAAATCAC GGAGGGGGTC
GTGCGCGACG AATACCTGCA CCGCAACTTC GGTGAAGAGT GGCTGAAGGC GAATTTTGAT
GCTTCCAAAG CCGAACTGGA AGAAGCCAAT CGTCAGAACC TGCCCTTGGT TTGGCTAATG
CTCAACGAAG TGGCCGATGA TGCTCGCGAA CTCGGGATGG AGCGTGAGTC GCTCGTCGAG
GACTTTATGA TTGCCTACGG TGAAGCTCTG GAAAACATCG GCTTCACAAC GCGCGAAATC
ATGCGTATGT CCGCCTATGG CCTTGCGGCC GTTTGA
 
Protein sequence
MPQLEASLEL DFQSESYKDA YSRINAIVIE GEQEAFDNYN RLAEMLPDQR DELHKLAKME 
QRHMKGFMAC GKNLSVTPDM GFAQKFFERL HENFKAAAAE GKVVTCLLIQ SLIIECFAIA
AYNIYIPVAD AFARKITEGV VRDEYLHRNF GEEWLKANFD ASKAELEEAN RQNLPLVWLM
LNEVADDARE LGMERESLVE DFMIAYGEAL ENIGFTTREI MRMSAYGLAA V