Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1593 |
Symbol | |
ID | 3775017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1660025 |
End bp | 1660720 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637800026 |
Product | hypothetical protein |
Protein accession | YP_400610 |
Protein GI | 81300402 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.286358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAGC TTGAAGCCAG CCTTGAACTG GACTTTCAAA GCGAGTCCTA CAAAGACGCT TACAGCCGCA TCAACGCGAT CGTGATTGAA GGCGAACAAG AGGCGTTCGA CAACTACAAT CGCCTTGCTG AGATGCTGCC CGACCAGCGG GATGAGCTTC ACAAGCTAGC CAAGATGGAA CAGCGCCACA TGAAAGGCTT TATGGCCTGT GGCAAAAATC TCTCCGTCAC TCCTGACATG GGTTTTGCCC AGAAATTTTT CGAGCGCTTG CACGAGAACT TCAAAGCGGC GGCTGCGGAA GGCAAGGTCG TCACCTGCCT ACTGATTCAA TCGCTAATCA TCGAGTGCTT TGCGATCGCG GCTTACAACA TCTACATCCC AGTGGCGGAT GCTTTTGCCC GCAAAATCAC GGAGGGGGTC GTGCGCGACG AATACCTGCA CCGCAACTTC GGTGAAGAGT GGCTGAAGGC GAATTTTGAT GCTTCCAAAG CCGAACTGGA AGAAGCCAAT CGTCAGAACC TGCCCTTGGT TTGGCTAATG CTCAACGAAG TGGCCGATGA TGCTCGCGAA CTCGGGATGG AGCGTGAGTC GCTCGTCGAG GACTTTATGA TTGCCTACGG TGAAGCTCTG GAAAACATCG GCTTCACAAC GCGCGAAATC ATGCGTATGT CCGCCTATGG CCTTGCGGCC GTTTGA
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Protein sequence | MPQLEASLEL DFQSESYKDA YSRINAIVIE GEQEAFDNYN RLAEMLPDQR DELHKLAKME QRHMKGFMAC GKNLSVTPDM GFAQKFFERL HENFKAAAAE GKVVTCLLIQ SLIIECFAIA AYNIYIPVAD AFARKITEGV VRDEYLHRNF GEEWLKANFD ASKAELEEAN RQNLPLVWLM LNEVADDARE LGMERESLVE DFMIAYGEAL ENIGFTTREI MRMSAYGLAA V
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