Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1588 |
Symbol | |
ID | 3775012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1653255 |
End bp | 1655834 |
Gene Length | 2580 bp |
Protein Length | 859 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800021 |
Product | CBS |
Protein accession | YP_400605 |
Protein GI | 81300397 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.497223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.185787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTCGTC TGCGTTTTCC GCCACGGTTT GCTAAAGCGC AGCAGTGGGC TGTGCTGGAA GCTTGCGCAA TCGGGCTGGT TTCAGGGGCG AGTGCCTTCC TGCTCAAACT GGGTGCAACG GGTGTTCAAG ATCTGCGCGA TCGCCCGGGA CTGCCACTTG GCCTGCAGCT CCTTTTGCCA CCGATTCTGG GCGCGATCGC CGGTTGGCTG GTGCAACGGT TTGCCCCCGA AGCCGAGGGC AGCGGCATCA GCCAAGTGCA AGCCGCACTG TCAGGCAGCC GCATCGCCTT GAACCTACGG GTTGCGATCG TCAAAATTGC CAGCACGATG CTGGTGGTTG GTTCAGGGCT GCCCCTAGGG CGGCAAGGCC CAACCGTGCA AGTGGGCGCT TCCCTCGCGG GTCAGATGAG CCAGTGGTTC CCCACCTCGC CAGACTACCG ACGACAGTTG ATTGCTTCCG GGGCTGCCGC TGGCCTCGCG GCTGGCTTTA ATGCACCGCT AGCCGGTGTG ATGCTAGTGC TGGAGCAACT GCTCCATGAT GTCTCTAGCT TCACCCTTGG GACAGCAGTC CTCGCAGCCT TTATTGGGGC AGTTGTTTCG GGAATTCTCG GCAGTCAAAG CCTGAGTTTC AGCTCTGAAA TTGTTGCTGC TCCAGCCGCC CTGACCGTGC CTGAGCTGCC CGTTGTCCTA CTTTTAGGAC TGTTTGCAGG GGGCCTAGGC ATTTTGTTCA ATCGCGGCTT GGCGTTCAGT CAACGCTGTT ATGAACGCTT ACCGCTCAAG GGGCTGCCTT GGCGGGTTGC GATCGCCAGT GGGATCTCGG CCTTACTACT GCTGTTGCTC CCTGCTGCGC TGCGGCAAGG CCTGAGTAAC CCCTTTAGGG TGACCATCCC GGACAGTGGC TCGATCGCGT TGCTGATGTT GGCGATCAAC TTTGGTCTGA CGCTGGTGGC TGCTGGATCA GGGGCTTCTG GCGGGATTTT TGCGCCAGCG CTGGTGCTCG GTTCCAGTTT GGGTCTGGGC GTGGTGCTTT CCATTCAGGC GATCTTTTTG CAGGTTGGGA TTCCGCTGCG GATCGATGCT CCGGCAACCT ATGCCTTGGC GGGTATGGGC GCGATGTTTA GCGCCGTCAC CCAAGGGCCG ATCACGGCGA TCGTGATTGT GTTCGAGATG ACCCGCGATT TCAACGCAGT GTTACCGCTG ATGGTGGCCT CGATTACCGC CTATGGAATT GCCAGCTTGG CGCGATCGCC CAGCAAAGCA GCCGCAGTGG TTGACGCCTT GCCAACTCTC AACAGCAGCT TGGGTCTGAC TGCTGCCCAG GTGATGGCTA GTCCTGTGGA AACTCTGGAA GCCAGCCTAC CCCTGACTGA AGTAATCCAG CAATTCAACC GCACTCACCA CCGAGGTTTT CCTGTTACTC AAAAAGGTGC TCTAGTCGGC ATTGTTACCA GCTCCGATCT GGATGAACAA ACCCTCAAAG GCAAAGGCGA GTCCGTGCGG CTCAGCGAAA TCATGACGCC TCACCCGCTG ACAGTTGCCC CCCAAGACAC TCTGGCCCAC GTTCTTTACG TGCTGAACCG CTTCCAAATC AGCCGGTTGC CCGTGGTCGA TGGCCGCAAG CTGGTCGGAA TCATCACACG AGCCGACATC ATTCGGGCCG AATCGGAACT CCTAAGCGGT CAAGATATTG CTGCGACGCC GATCGCCCCC TCCTACGTCG CCTACGAAAC GCGATCGCCC GCTACCGGCC AAGGACGTCT GCTAGTGCTA CTGGCCAATC CGCGCACAGC TCAATCTCTG TTGCAGTTGG CGGCAGGGCT CGCCAGTTTG CGGAACTACG AGCTGGAATG TCTGCACCTG ATTCCTGTCT CTCGCGAAGC CGATCCCTCT CAAACAGCAG TTTCAACTCT TGGAGCACGG CGAATGTTGC GGCAGGCCGA GCGGTTGGGC CGACGCTGGC AGATTCCGGT TCATACGCAA GTCCGGGTTT GTCACGATCT TTCTGCTGCG ATTCTAGAAA CGATTAGCGA TCGCCACATC AACGATCTCG TGATGGGCTG GGGTGGCGGG GCTTCCTTAG CCCAACGGCT GTTCCGCGAA GGGATTGATC AGATTTTGCA GCAGGCTCCC TGCCGGGTGC TGTTGGTCAA ACCCGGGGCT GCATTCCTGG CCAAGGCGCC ACTCCTGCAG GGCGATCGCC CGACTCTGCC GCTACGCCAT TGGCTGATTC CCCTCAGCGC CCAGGTGCCC CAGACAGGTT TGGCCGAGCC CTTGGAACAA ATCCTGCAGT TGATTACCGA TCCAGATATC TCCCTCTGTC AGATCGACCT CCCTCGACAA ACCGTTTCAG CCAACCGTCT CCAGCAGCTG CAGCGACGAC TGGAGAACCG CCTGCGGCAA CCCATCCAAG CAGACTTGAT CTGTGCGCGA TCGGTGACAG CAGTGCTATT GGATGTGATG CAAAGTCGAG GGATCGAAGC GGTGATGCTA TCGATGACCT TGGAACAGCT GCCCACCACA ACCCTCTGGA AAGATCTGTT AGCACAGGCA CCGCAAACCG TAATCATTCA GAGACGTTAA
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Protein sequence | MFRLRFPPRF AKAQQWAVLE ACAIGLVSGA SAFLLKLGAT GVQDLRDRPG LPLGLQLLLP PILGAIAGWL VQRFAPEAEG SGISQVQAAL SGSRIALNLR VAIVKIASTM LVVGSGLPLG RQGPTVQVGA SLAGQMSQWF PTSPDYRRQL IASGAAAGLA AGFNAPLAGV MLVLEQLLHD VSSFTLGTAV LAAFIGAVVS GILGSQSLSF SSEIVAAPAA LTVPELPVVL LLGLFAGGLG ILFNRGLAFS QRCYERLPLK GLPWRVAIAS GISALLLLLL PAALRQGLSN PFRVTIPDSG SIALLMLAIN FGLTLVAAGS GASGGIFAPA LVLGSSLGLG VVLSIQAIFL QVGIPLRIDA PATYALAGMG AMFSAVTQGP ITAIVIVFEM TRDFNAVLPL MVASITAYGI ASLARSPSKA AAVVDALPTL NSSLGLTAAQ VMASPVETLE ASLPLTEVIQ QFNRTHHRGF PVTQKGALVG IVTSSDLDEQ TLKGKGESVR LSEIMTPHPL TVAPQDTLAH VLYVLNRFQI SRLPVVDGRK LVGIITRADI IRAESELLSG QDIAATPIAP SYVAYETRSP ATGQGRLLVL LANPRTAQSL LQLAAGLASL RNYELECLHL IPVSREADPS QTAVSTLGAR RMLRQAERLG RRWQIPVHTQ VRVCHDLSAA ILETISDRHI NDLVMGWGGG ASLAQRLFRE GIDQILQQAP CRVLLVKPGA AFLAKAPLLQ GDRPTLPLRH WLIPLSAQVP QTGLAEPLEQ ILQLITDPDI SLCQIDLPRQ TVSANRLQQL QRRLENRLRQ PIQADLICAR SVTAVLLDVM QSRGIEAVML SMTLEQLPTT TLWKDLLAQA PQTVIIQRR
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