Gene Synpcc7942_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1577 
SymbolargS 
ID3775001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1640261 
End bp1642033 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content56% 
IMG OID637800010 
Productarginyl-tRNA synthetase 
Protein accessionYP_400594 
Protein GI81300386 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA TTTTGGTAAT GGCTGCCCCT CTCGCGCAAC TTCGCGATCG CTTTCAAGCG 
GCATTGGCCG CGAGCTTTGG TCCCGAGTGG GCAGCGACGG ATCCTCTGCT TGTGCCCGCC
ACCAATCCTA AGTTCGGCGA CTATCAGTCG AATGTGGCAA TGTCTTTGGC GAAGCAACTT
GGCCAACCAC CTCGGGCGAT CGCAGAAACC CTTGTTCAAA ATCTTAATCT GGCCGATCTC
TGTGAACCGC CTGCGATCGC GGGGCCGGGC TTCATCAACT TCACGCTGCA GCCGTCCTAT
TTAGTTGCGC AACTGCAACA ACTGCAGACG GATGAACGGC TAGGGATTCA ACCGGTCAGC
CCACCGCAGC GCGTGATCGT CGACTTTTCT AGCCCCAACA TTGCCAAGGA AATGCATGTT
GGTCACCTGC GATCGACGAT TATTGGTGAC AGTATTGCGC GGGTGCTGGA GTTCCAAGGC
CATGAGGTGC TGCGGCTCAA CCACGTCGGC GATTGGGGCA CCCAGTTTGG CATGTTGATT
GCCTTCCTGC AGGAGCAATA TCCGCAGGCC CTCAGTCAGC CAGATGCACT GGATATCAGT
GACTTGGTAG CGTTCTACAA ACAGGCCAAG GCGCGCTTTG ACGAAGACCC GAGCTTCCAA
GAGACGGCTC GGCAGCGCGT GGTCGATCTG CAGTCGGGTG AAGCTACGGC GCGTCAGGCA
TGGCAGTTGC TTTGCGATCA ATCGCGGCGC GAATTTCAGA AAATCTACGA TCGCCTCGAT
ATTCAGCTCG AAGAACGGGG TGAGAGCTTC TACAATCCCT ATCTGCCAGC GATCGTTGAA
GACCTGCGGC GACTGGGTCT GCTGGTGGAA GACCAGGGCG CACAATGCGT GTTTCTGGAG
GGCTTCCAGA ACAAAGAAGG TCAGCCCTTG CCGCTGATTG TCCAGAAAAG TGACGGTGGC
TATAACTACG CCACGACGGA TTTGGCAGCA CTGCGTTATC GCCTGGGTCA AGATCAGGCC
CAGCGGATTA TCTACGTTAC GGATTCGGGG CAGGCCAATC ACTTTGCCCA AGTTTTCCAA
GTGGCGCAAC GAGCGGGTTG GTTGCCAGCG GCTGCGCAGA TTGAGCATGT CCCTTTTGGG
CTAGTGCAGG GAGAAGACGG TAAAAAGCTG AAAACTCGCG CTGGTGACAC GGTCCGTCTG
CGGGATCTGC TAGATGAAGC GGTCGATCGG GCTCGCACGG ATCTGACGAC CCGCATTGCT
GCTGAAGAGC GATCGGAAAC CCCGGAATTT ATTGAAGCCG TGGCGCAAGC GGTTGGTCTT
GGCGCGGTGA AGTACGCTGA CCTTAGCCAG AACCGCAACA GCAACTACAT CTTTAGCTTT
GACAAGATGC TGGCGCTGCA AGGCAATACG GCGCCTTATC TGCTCTACGC CTACGTGCGG
ATTCAGGGCA TTGCTCGCAA AGGTGGCATT GATTTTGCGC AACTGGATCC CGTGGCTGCA
GTGCTGACGG AACCCACTGA GCGATCGCTG GCGAAGCAAG TGTTGCAACT AGGTGAAGTC
CTAGATGAAG TCGCCCGCGA CCTGCTGCCA AATCGCCTTT GCAGCTATCT GTTTGAACTG
AGCCAAACCT TCAACCAGTT CTACGATCGC TGCCCAATTC TCAACGCGGA AGAACCCCAG
CGCACCAGCC GTCTATTGCT CTGCGACTTG ACGGCACGAA CTCTCAAGCT AGGCCTATCG
CTGCTGGGAA TCTCGGTGCT GGAGCGGATG TAA
 
Protein sequence
MLKILVMAAP LAQLRDRFQA ALAASFGPEW AATDPLLVPA TNPKFGDYQS NVAMSLAKQL 
GQPPRAIAET LVQNLNLADL CEPPAIAGPG FINFTLQPSY LVAQLQQLQT DERLGIQPVS
PPQRVIVDFS SPNIAKEMHV GHLRSTIIGD SIARVLEFQG HEVLRLNHVG DWGTQFGMLI
AFLQEQYPQA LSQPDALDIS DLVAFYKQAK ARFDEDPSFQ ETARQRVVDL QSGEATARQA
WQLLCDQSRR EFQKIYDRLD IQLEERGESF YNPYLPAIVE DLRRLGLLVE DQGAQCVFLE
GFQNKEGQPL PLIVQKSDGG YNYATTDLAA LRYRLGQDQA QRIIYVTDSG QANHFAQVFQ
VAQRAGWLPA AAQIEHVPFG LVQGEDGKKL KTRAGDTVRL RDLLDEAVDR ARTDLTTRIA
AEERSETPEF IEAVAQAVGL GAVKYADLSQ NRNSNYIFSF DKMLALQGNT APYLLYAYVR
IQGIARKGGI DFAQLDPVAA VLTEPTERSL AKQVLQLGEV LDEVARDLLP NRLCSYLFEL
SQTFNQFYDR CPILNAEEPQ RTSRLLLCDL TARTLKLGLS LLGISVLERM