Gene Synpcc7942_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1574 
Symbol 
ID3774998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1633895 
End bp1636567 
Gene Length2673 bp 
Protein Length890 aa 
Translation table11 
GC content55% 
IMG OID637800007 
Productglucosidase 
Protein accessionYP_400591 
Protein GI81300383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.786209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.991499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTG AACAACAGCG AATTCAGCAG AGCGTGGAAC CCAATTCGCC TTGGCGACAA 
TGGGGACCCT ATCTGAGTGA GCGGCAGTGG GGCACGGTGC GCGAAGACTA CAGTGCTGGC
GGCGATGCTT GGGATTATTT CCCCCATGAT CATGCGCGAT CGCGGGCTTA TCGCTGGGGG
GAAGATGGGC TGGGTGGTTT TTGCGATCGC CAAGCCAATA TCTGCTTTGC GCTGGCCTTT
TGGAATGGCA ACGATCCCAT TCTGAAAGAG CGGCTGTTTG GCTTGACAAA TTCTGAGGGA
AACCACGGGG AAGACGTCAA AGAATACTAC TTTTACGTCG ACAACACCCC TACCCACAGC
TACATGCGCT GGCGGTATAA ATATCCCCAA GCGGCCTACC CCTACGAGAC ACTTGTCACG
GTCAATGGGC AGCGATCAAA GTTCGAGCCG GAGTATGAGC TGCTCGATAC CGGCATTTTT
GACAGCGGCT ATTTCGATAT CGAAGCGGAA TATGCCAAAG CAACGCCATC TGACCTTGGC
ATTCGCCTCC AGATCACCAA TCGCGGACTG CAAACTGCCC CGATCGCGGT GCTACCGACA
TTATGGCTGC GTAATACCTG GACTTGGACA GGGGAGGTGC CTGCCGGCAG GCTCACACAA
GTTGATGACC AAGCGATCAA ACTGAGCCAC CGCGATTACG GCGATCGCTG GCTTTACTGC
GATCGGGTAA ATGGTGCCGA GCTAGAGCTG CTGTTTACCG ACAACGAAAC GAACTTTGCA
CGACTGTTTG GCAGCACTAA TCCGTCGCCT TACGTCAAGG ATGCGTTTCA TCAATACCTA
ATCGAAGGCG ATCGCGAGGC AGTCAATCCG GTGCAGACCG GCACGAAAGC GGCGGCTTGC
TATCGCTTAG AAATCCCAGC CGGCCAAACC GTCACGCTCC AACTTCGCTT TTGCGATCGC
CCCCAGACTG CTGCTTTTGA CACCGATTTT GCTGACAGCT TCAGCCAACG GCAGCAGGAA
GCCGACGACT TTTACCAAAC GCTCTTTCCT AAACTGGGCG ACGGCGATCG CCTAATTCAG
CGCCAAGCTT TAGCTGCTTT GCTCTGGAGT AAGCAGGTCT ATCTCTACGA AGTGCAGACT
TGGCTGCAGG GTGATGCAGG ACAACCACCG CCACCAAGTC CCCGGAGCAA GGGCCGCAAT
ACCAATTGGC GCATGTTCTC TGCCAACGAG GTCATCCTCA TGCCTGACAA GTGGGAATAC
CCTTGGTTTG CGGCTTGGGA CTGGGCCTTT CACTGCGTCG TGATGGCACT CATCGATCCT
GAGTTTGCCA AACAGCAGCT ACGCCTGTTG CTAAGCGATA ACTACGTCAG TCCTAAGGGT
CAGATTCCGG CCTATGAGTG GGCCTTTGGT GATGTCAATC CGCCTGTTCA GGCTTGGGCC
GCTTGGAAGA TTTACCAATC AGAAAAGGTT AGAACTGGCG AGGGCGATCG CGAATTTCTA
CAGCAGATAT TCCAGCGCCT GTTACCGAAT TACTACTGGT GGCTGAACCG AGAAGACCGT
GACGATAAGA GCCTATTCCA AGGCGGTTTT CTAGGACTGG ATAACATCAC AATTTTCAAT
CGCAGCGCTC CTCTCCCAAC GGGCGGCTAC CTTGAACAGT CCGATGGCAC CGCTTGGATG
GGACTGTTTT CGCTCAATAT GCTGGCGATC GCCCTGGAGC TGAATCAGCA AGGCACGATT
TACGACCACG CGATCAGCAG CTTTGTGCGG CAGTTCCTCA ACATTGCCCA GGCGATGAAT
CAAATGGGTG ATGACAATCT GGCGTTGTGG GACGAGACAC ACGGCTTCTA CTTCAGTGCC
CTCCGGCTCC CTGATGACAG TGAGGAGCAG CTACAGGTCT ACTCCTTGGT GGGATTAGCG
CCAATGCTGG CCGTGCTGAC GCTGGAGCCT AAATTTGTCC ATGACTTGTC TGACATTCAA
GAGGTGATGG ACTGGGCCGC CAAGCATCAC CCGGAACTGA TCAACAACGT TGTCTGCACA
ACAACGGAAT GCAGCGAACA ACGCCATCTT CTCGCGATCG CTAGTCCTGA TCAGCTGCGG
CGGTTACTGC AGCGACTACT CAATGAGGAC GAATTTCTGT CGCCCTACGG CATTCGCTCG
ATCTCGAAGG CCCATGCTCA AGACCCCTTC GTTCTTCACT ATCAAGGCAA CAGCTTCGGG
GTGGACTACG AGCCGGGAGA ATCGACCAGC GCCACCTTTG GCGGCAATTC CAACTGGCGC
GGCCCGATCT GGTTCCCTAT GAACTATCTC TTGATCGAAG CGCTACAGCG CTACTACCAC
TACCTCGGCG ACGAGTTCCA GGTTGAATGT CCCACTGGCT CAGGACAACT GATGACACTC
AAACAGGTCG CCCAAGAACT GTCGCAACGG CTGGTCAACA TCTTCCGCAC GCAACCTGAT
GGTTCTCGAC CCACTTACGG CGACATCGAA CGCTTCCAGA TCGATCCCCA CTGGCGTGAT
CTGCTGCTGT TCCATGAATA CTTCCACGGT GATACCGGCA AAGGTCTGGG CGCGAGTCAG
CAAACTGGCT GGACTGCCTT GGTTGCCCAG TTGATTCAAG AACTAAACGA CGAGACTTTC
TACGACTCTC TGGGCTTGAT GCCATCGTTT TAG
 
Protein sequence
MNPEQQRIQQ SVEPNSPWRQ WGPYLSERQW GTVREDYSAG GDAWDYFPHD HARSRAYRWG 
EDGLGGFCDR QANICFALAF WNGNDPILKE RLFGLTNSEG NHGEDVKEYY FYVDNTPTHS
YMRWRYKYPQ AAYPYETLVT VNGQRSKFEP EYELLDTGIF DSGYFDIEAE YAKATPSDLG
IRLQITNRGL QTAPIAVLPT LWLRNTWTWT GEVPAGRLTQ VDDQAIKLSH RDYGDRWLYC
DRVNGAELEL LFTDNETNFA RLFGSTNPSP YVKDAFHQYL IEGDREAVNP VQTGTKAAAC
YRLEIPAGQT VTLQLRFCDR PQTAAFDTDF ADSFSQRQQE ADDFYQTLFP KLGDGDRLIQ
RQALAALLWS KQVYLYEVQT WLQGDAGQPP PPSPRSKGRN TNWRMFSANE VILMPDKWEY
PWFAAWDWAF HCVVMALIDP EFAKQQLRLL LSDNYVSPKG QIPAYEWAFG DVNPPVQAWA
AWKIYQSEKV RTGEGDREFL QQIFQRLLPN YYWWLNREDR DDKSLFQGGF LGLDNITIFN
RSAPLPTGGY LEQSDGTAWM GLFSLNMLAI ALELNQQGTI YDHAISSFVR QFLNIAQAMN
QMGDDNLALW DETHGFYFSA LRLPDDSEEQ LQVYSLVGLA PMLAVLTLEP KFVHDLSDIQ
EVMDWAAKHH PELINNVVCT TTECSEQRHL LAIASPDQLR RLLQRLLNED EFLSPYGIRS
ISKAHAQDPF VLHYQGNSFG VDYEPGESTS ATFGGNSNWR GPIWFPMNYL LIEALQRYYH
YLGDEFQVEC PTGSGQLMTL KQVAQELSQR LVNIFRTQPD GSRPTYGDIE RFQIDPHWRD
LLLFHEYFHG DTGKGLGASQ QTGWTALVAQ LIQELNDETF YDSLGLMPSF