Gene Synpcc7942_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1566 
Symbol 
ID3774990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1623449 
End bp1625644 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content56% 
IMG OID637799999 
Productpolyphosphate kinase 
Protein accessionYP_400583 
Protein GI81300375 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0855] Polyphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0569549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCT TGCTAGGATC AGCGGCTGAT TCTGTGATGA GATTGGCCAT GACCGATGCT 
GCGATTGAAC TGAATCGGCC AGAAAATTTC TTTAATCGTG AAATTAGCTG GCTGGCTTTC
AATCAGCGCG TTCTACACCA AGCCCTCGAC CCCCGCACGC CTCTGCTGGA ACGCCTCAAG
TTCATGGGGA TTTTCAGCAA TAACCTCGAT GAATACTTCA TGGTGCGCGT GGCGAGTCTC
TTGCAGCAAA TTGAGGCTGG CGTCAGCAAG CGATCGCCCG ATGGCCTCAC CCCAGCGGAG
CAACTCGAGC AAATTCGAGC CTGCCTTGGC CCCCTGGTGG AGCAACAACA CAGCCATTTC
TACCGAGAGC TACGCCCCCT GCTGGCTGAA ACGGGCATCC ATCTGCTCAA CTACAACGAC
CTCAACCGCA CCCAACAGCG ATACCTCGAT CAGTATTTCG CAGCGCAGAT TTTTCCAGTC
TTGACACCGC TCGCGGTTGA TCCGGCGCAC CCCTTCCCCC ACATTTCCAA TCTCAGTCTC
AACTTGGCGG TCTTGATCCA AGACGACAGT GTTGGCGAGG AGCAGTTTGC GCGGATTAAG
GTGCCGAACA TTCTGCCGCG CTTTATTGAA CTGCCGGCCA AAACCCGCCG GCGATCGCAG
CAACCGATTG TCTGGATGGG CGTACCGATC GAACAGGTAA TCGCCCACAA CCTCAGCACG
CTTTTCCCAG GCATGAGCGT GATCGATTGG TTTGTCTTCC GTGTCACCCG CGATGCTGAC
CTCGATGTCA AGGAAGACGA AGCTGACGAT CTGCTGTTGG CGATCGAACA AGAATTGCGT
AAGCGACGCC TGGGGGCAGG CTCAGTCGTC CGCCTAGAAA TTGAGGCAGG CTCTCCAGCC
TCCATCCTCG AAATCCTGAT GAACGGCATG GACCTCGATC CGCAGGATGT CTATGCCCTA
CCCGGTCTCC TGAGCCTTGA AGACCTGATG TCGCTGACGT CCTTGCCGTT GCCCGAACTG
AAGGATCAGC CTTGGACGCA AGTGGTTCCC AAGCGATTGC GGCGGGTACA AATGCCCGTT
GGCGAAGACC TGCAGCGTTC TAAGCCCAGT GAGGAAAGCG AAGACATCTT TACGGTGATT
CGCCAGCGCG ACCTGTTGAT GCATCACCCC TACGATTCTT TTGCGGCTTC AGTCGAACAG
TTCGTTGCCC AAGCCGCAAC AGATCCCCAC GTGCTGGCTA TCAAAATGAC GCTCTATCGC
ACCTCGGGAG ATTCGCCGAT TGTGCAGAGC CTGATGCAGG CTGCGGAGCA TGGCAAGCAG
GTGCTCGCTC TTGTAGAACT CAAAGCTCGC TTTGATGAAG AGAACAACAT CACCTGGGCG
CGGCGCCTTG AGAAAGCAGG TGTGCATGTT GTCTATGGCT TAGTGGGTCT CAAGATTCAC
ACCAAAGTGG TGTTGGTGGT TCGCCAAGAG CGCAACCAAA TCCGTCGCTA TGTTCATATC
GGCACCGGCA ACTACAACTC CAAAACAGCC CGCATCTACA CTGACTTGGG GCTCTTGAGC
TGCCGTGAGG ATTTGGGCGC TGATATTTCT GAACTCTTCA ACTACCTGAC GGGTTTCTCG
AAGCAACGGG ACTATCGCAA GCTGCTGATT GCGCCGGTCA GCTTGCGGGA GCAAATGATC
GGCCTGATCG ATCGCGAAAT TCAGCATGCG ATCGCAGGGC GTCCGGCAGC GATTCGCGCC
AAGATGAACT CGCTAGTTGA TCCTAAAATC ATCCTCAAGC TCTATGAGGC CTCACAAGCT
GGCGTCGAGA TTGATTTGAT TGTGCGGGGG GTCTGCTGCC TACGACCGGG TGTGCCGGGG
TTGAGCGATC GCATTCGGGT GATTAGTATC ATTGGCCGCT TCCTCGAACA CTCGCGCATC
TTCAGCTTCC ACAACAACGG CCAGGAAGAG TTTTTCATCG GCAGTGCGGA CTGGATGACC
CGTAACCTCG ATCGCCGCGT AGAAGCGATT ACCCCTATTG AAGATGAAGC GATCGCAGCA
GAACTGCGGG CAATCCTGGA TATTTCCTTA GCCGACGACC GACTGGCCTG GGATTTACTG
CCCAGTGGTG AGTACCAACT CCGGCAACCG GTGGATCCCG AGACTCCCCA TAGTTCGCAG
CAGCAATTCA TGAATCGCGC GGCTACCACC CGCTAG
 
Protein sequence
MHPLLGSAAD SVMRLAMTDA AIELNRPENF FNREISWLAF NQRVLHQALD PRTPLLERLK 
FMGIFSNNLD EYFMVRVASL LQQIEAGVSK RSPDGLTPAE QLEQIRACLG PLVEQQHSHF
YRELRPLLAE TGIHLLNYND LNRTQQRYLD QYFAAQIFPV LTPLAVDPAH PFPHISNLSL
NLAVLIQDDS VGEEQFARIK VPNILPRFIE LPAKTRRRSQ QPIVWMGVPI EQVIAHNLST
LFPGMSVIDW FVFRVTRDAD LDVKEDEADD LLLAIEQELR KRRLGAGSVV RLEIEAGSPA
SILEILMNGM DLDPQDVYAL PGLLSLEDLM SLTSLPLPEL KDQPWTQVVP KRLRRVQMPV
GEDLQRSKPS EESEDIFTVI RQRDLLMHHP YDSFAASVEQ FVAQAATDPH VLAIKMTLYR
TSGDSPIVQS LMQAAEHGKQ VLALVELKAR FDEENNITWA RRLEKAGVHV VYGLVGLKIH
TKVVLVVRQE RNQIRRYVHI GTGNYNSKTA RIYTDLGLLS CREDLGADIS ELFNYLTGFS
KQRDYRKLLI APVSLREQMI GLIDREIQHA IAGRPAAIRA KMNSLVDPKI ILKLYEASQA
GVEIDLIVRG VCCLRPGVPG LSDRIRVISI IGRFLEHSRI FSFHNNGQEE FFIGSADWMT
RNLDRRVEAI TPIEDEAIAA ELRAILDISL ADDRLAWDLL PSGEYQLRQP VDPETPHSSQ
QQFMNRAATT R