Gene Synpcc7942_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1565 
Symbol 
ID3774989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1622970 
End bp1623410 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content57% 
IMG OID637799998 
Producthypothetical protein 
Protein accessionYP_400582 
Protein GI81300374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0312128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCAA CCCAGCGCAA ACTGTTGATG CAGCTCGTCA TTGGTGCCGC TTGGGTCGAC 
GGGGACCTCG ATCAGCCAGA GCGACAGTAC CTGCAAACTC TTCTGGAGCG GCAGAAGCTT
GATCACGATC CAGACTTGCT GGTACTCCTC GAAACCCCAA TCGGACTGCC TCAACTGGAA
GCTTGGCTTG TTACCTTTCT ACAGGGGACC AGCACCCCAA CACGCTTGGC GGCTCTGGCC
ACGATCGCCA ATCTACTGAT GGCCGACGGC GTTGTTAATC GCAGTGAGCA TAGCCTACTG
GATGAAATCC ACTCACTGAT GGCGCAGATT CCCGCAAGTC GCGACGAAGA AGAGTATCGG
CAAGCGGCCC CAGGCTTAGT CCAGGGATTG AGTGGTCTCG TGCGCCGCGC CCTAAATGGA
GCCAAGCATC TCTTTCAGTG A
 
Protein sequence
MNATQRKLLM QLVIGAAWVD GDLDQPERQY LQTLLERQKL DHDPDLLVLL ETPIGLPQLE 
AWLVTFLQGT STPTRLAALA TIANLLMADG VVNRSEHSLL DEIHSLMAQI PASRDEEEYR
QAAPGLVQGL SGLVRRALNG AKHLFQ