Gene Synpcc7942_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1562 
Symbol 
ID3774986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1618800 
End bp1619696 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content51% 
IMG OID637799995 
ProductADP-ribosylglycohydrolase-like 
Protein accessionYP_400579 
Protein GI81300371 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000180951 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAA TCACACAACT GTCTCGTGCC CAAGCCTGTT TCCTTGGTCT TGCCATCGGC 
GATGCACTCG GTGCACCTGT TGAGTTTCAA AAGCCTGGAT CTTTTGAACC GATTACCGGC
TATCGCGATG GCGGGCCTTT CAACCTCAAA GCCGGTCAAT GGACAGATGA TTCTTCCATG
GCTTTATGTC TCGCAGAATC ACTTCTGGCC TGCGGCAAGT TGGATTTAAA AGATAACCTC
GATCGCTACT GTCGTTGGTG GCAACACGGC GAAAACTCGG TCATCGGCGA TTGCTTTGAC
ATTGGTAATG GCACTCACTC TGCTCTCAGT CATTACCTCA GGACAGGGGA AGTTGAAGCA
GGGGGCTTAA ATGCTCTGGG AAACGGCGCT CTGATGAGGA TGGCTCCGAT TCCCATTTGG
TCCAACCAAG ATATTGCCGA TGCCATTGAC TTAGCTCAAC AGAGTACCGT CACGACTCAT
CGTCATCCCC AAGCGATCGC TCTTTCGGGA TACTTTGCCG AGCTACTGGT TCGAGCCTTG
CAAGGAGAGT CAAAGACAGA CTTGCTTTCA GGGCATTGGT ATCAACATCC TGATGCTGAG
ATTGTGGAAG TGGTTCGAGG TAGTTGGCAA ACCTCGACAA ACATCCGCGC TCAGGGTCAT
GCCCTCTATG CCTTGGAAGC TGCTCTCTGG GCATTTGGAA CCACCACATC CTTTGCAGAT
TGCTTACTCG CAGCGGTGAA TCTGGGCGAA GATTCCGATA CCGTGGGAGC GATCGCAGGA
CAGATTGCGG GTGCCCACTA CGGGCTCGAA GCAATCCCTG ATGACTGGAT TGCAGGATTA
CAAGATAGCG ATCGCTTCCA AACTTTGGCA GAGAAACTTT TCAATCGCAG CATTTAG
 
Protein sequence
MSSITQLSRA QACFLGLAIG DALGAPVEFQ KPGSFEPITG YRDGGPFNLK AGQWTDDSSM 
ALCLAESLLA CGKLDLKDNL DRYCRWWQHG ENSVIGDCFD IGNGTHSALS HYLRTGEVEA
GGLNALGNGA LMRMAPIPIW SNQDIADAID LAQQSTVTTH RHPQAIALSG YFAELLVRAL
QGESKTDLLS GHWYQHPDAE IVEVVRGSWQ TSTNIRAQGH ALYALEAALW AFGTTTSFAD
CLLAAVNLGE DSDTVGAIAG QIAGAHYGLE AIPDDWIAGL QDSDRFQTLA EKLFNRSI