Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1559 |
Symbol | |
ID | 3774983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1616284 |
End bp | 1616958 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799992 |
Product | hypothetical protein |
Protein accession | YP_400576 |
Protein GI | 81300368 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0111619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAT CGCTATTGCG AGGACTTCGC CGTCGTTGGT CTTGGCATCA ACCCGCTTGG CGCGCCCGGT TTTACCAGTG GCTCTACCCG CAGATTCAGG CCGATCGTGT CGGCCGCCAC CTGCAGCTCA GCGGTGAGGA GCGGATTTGG ATTGCCCCGG GCTGCATCAT TCACGATGAG GTAGAGCTCG TTGCAAAAGC AGGAGCCCGT ATTCGCATTG GCCCAGGCTG CACCCTCTAT CCGCGCACTA AACTCTTGGC CTATTCAGGC GATCTCGTGC TGGAAGGGGA TGTCTCGGTG AACTCCTTCG CGATCGTGTT TGCCAACAGC GGAACTAGCA TTGGACGCAT GACCCGCATC GCCTCTCATG CAGTCATCAA CCCGACAGAG CATCGCTACG ATGATCCCAC CCGCCCAATT GATGACCAGC CCATTTCCAA TCGACCAGTT CAAATTGGTG CAGACTGCTG GATCTGTACG GCAGCGATCG TTAGGGGGGG GACCCAGTTA GGCGATGGCA GTATCGTAGG AGCCCAAGCT TTAACGAGGG GAAGCTATCC AGCAGGGTCC GTCCTCGTTG GATCTCCAGC ACGAATTCTG AAGCAACGCA CAGTGTTGGC TGATCCGACG CAGCAACAGA CGAGCCTAGC GATTGAGCAT CAGGATGCCC TCTAA
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Protein sequence | MLRSLLRGLR RRWSWHQPAW RARFYQWLYP QIQADRVGRH LQLSGEERIW IAPGCIIHDE VELVAKAGAR IRIGPGCTLY PRTKLLAYSG DLVLEGDVSV NSFAIVFANS GTSIGRMTRI ASHAVINPTE HRYDDPTRPI DDQPISNRPV QIGADCWICT AAIVRGGTQL GDGSIVGAQA LTRGSYPAGS VLVGSPARIL KQRTVLADPT QQQTSLAIEH QDAL
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