Gene Synpcc7942_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1559 
Symbol 
ID3774983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1616284 
End bp1616958 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content57% 
IMG OID637799992 
Producthypothetical protein 
Protein accessionYP_400576 
Protein GI81300368 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0111619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAT CGCTATTGCG AGGACTTCGC CGTCGTTGGT CTTGGCATCA ACCCGCTTGG 
CGCGCCCGGT TTTACCAGTG GCTCTACCCG CAGATTCAGG CCGATCGTGT CGGCCGCCAC
CTGCAGCTCA GCGGTGAGGA GCGGATTTGG ATTGCCCCGG GCTGCATCAT TCACGATGAG
GTAGAGCTCG TTGCAAAAGC AGGAGCCCGT ATTCGCATTG GCCCAGGCTG CACCCTCTAT
CCGCGCACTA AACTCTTGGC CTATTCAGGC GATCTCGTGC TGGAAGGGGA TGTCTCGGTG
AACTCCTTCG CGATCGTGTT TGCCAACAGC GGAACTAGCA TTGGACGCAT GACCCGCATC
GCCTCTCATG CAGTCATCAA CCCGACAGAG CATCGCTACG ATGATCCCAC CCGCCCAATT
GATGACCAGC CCATTTCCAA TCGACCAGTT CAAATTGGTG CAGACTGCTG GATCTGTACG
GCAGCGATCG TTAGGGGGGG GACCCAGTTA GGCGATGGCA GTATCGTAGG AGCCCAAGCT
TTAACGAGGG GAAGCTATCC AGCAGGGTCC GTCCTCGTTG GATCTCCAGC ACGAATTCTG
AAGCAACGCA CAGTGTTGGC TGATCCGACG CAGCAACAGA CGAGCCTAGC GATTGAGCAT
CAGGATGCCC TCTAA
 
Protein sequence
MLRSLLRGLR RRWSWHQPAW RARFYQWLYP QIQADRVGRH LQLSGEERIW IAPGCIIHDE 
VELVAKAGAR IRIGPGCTLY PRTKLLAYSG DLVLEGDVSV NSFAIVFANS GTSIGRMTRI
ASHAVINPTE HRYDDPTRPI DDQPISNRPV QIGADCWICT AAIVRGGTQL GDGSIVGAQA
LTRGSYPAGS VLVGSPARIL KQRTVLADPT QQQTSLAIEH QDAL