| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1549 |
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| Symbol | |
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| ID | 3774973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1606129 |
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| End bp | 1606689 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637799982 |
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| Product | SOS mutagenesis protein UmuD |
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| Protein accession | YP_400566 |
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| Protein GI | 81300358 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.093809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGGTG GGGCTAGGGC AGGAGCGGGT CGCCCAAAAG GTAGCGGCAA GTATGGCGAA
CCGACCAAAG CCGTTCGTCT ACCCCTGAGT GTGATTGAGC AAATTCCCCA GATCCTAGAA
CAGAGATCGT CCAGAACCAC TCTGAGCGAG GTCTATCGCC CGCAACGCGG TGCGGTTCTA
GAACTGCCGC TCTACCAAAT GCCAGTCTCA GCAGGTTTCC CTTCCCCTGC CGATGACTAT
ATTGAGCAAC GACTAGACCT GAACCGGCAT CTGATTAAGA ACCCCGCCGC CACCTTCATG
GCACGGGTTT CGGGCGATTC GATGATTGGG GTAGGGATCC ACGACGGGGA CGTGATTATC
GTGGACCGTT CCCTCGAACC CCGCGATGGG CAGATTGTGA TTGCAGTCTT AAACGGTGAG
TTAACCGTGA AGCGTCTACG GCAAGAGCGG CAACGACTGT TTCTGCAAGC CGAGAACCCA
AATTACCCCG ACCTTGAGAT TACGGATGCC AGTGCCTTTC AAATCTGGGG TGTGGTCACC
AATGTCATTC ACGCCCTTTG A
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| Protein sequence | MKGGARAGAG RPKGSGKYGE PTKAVRLPLS VIEQIPQILE QRSSRTTLSE VYRPQRGAVL
ELPLYQMPVS AGFPSPADDY IEQRLDLNRH LIKNPAATFM ARVSGDSMIG VGIHDGDVII
VDRSLEPRDG QIVIAVLNGE LTVKRLRQER QRLFLQAENP NYPDLEITDA SAFQIWGVVT
NVIHAL
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