| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1547 |
|---|
| Symbol | |
|---|
| ID | 3774971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1603035 |
|---|
| End bp | 1603415 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637799980 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400564 |
|---|
| Protein GI | 81300356 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00748357 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCG CCATGCATCA ATCTAAATTA AACGAAGAAG CACTCATCCT TGAGGCAGAG
AGGAAGACTA CATCTCTTGG GCGATTGACA GAGTTAGCAC AATCAAGGCT TGTTAGTGTT
CGAGCATCCG TTGCAGGGAA CATCCAAACC CCAGTTGCAG TATTAGAAAG CTTATCAGCA
GACCATGATT ATGTGGTTCA TTGCGCAGTT GCTGAGAACA GAAAAACACC GATCATAGTC
CTAAAAAAGT TAGCATTCGA TGCTAATCAA TGGGTTCGCA ATGAAGTCAG GGAGAATCCA
AACACACCAA TTGAAATCAA AGAGAGTATA GATGTGCATG GAATTGATGA TTTTAATCTA
AATAACAATG AAAATGAATG A
|
|---|
| Protein sequence | MIIAMHQSKL NEEALILEAE RKTTSLGRLT ELAQSRLVSV RASVAGNIQT PVAVLESLSA
DHDYVVHCAV AENRKTPIIV LKKLAFDANQ WVRNEVRENP NTPIEIKESI DVHGIDDFNL
NNNENE
|
|---|
| |