Gene Synpcc7942_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1544 
Symbol 
ID3774968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1600802 
End bp1601053 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content54% 
IMG OID637799977 
Productpanthotenate metabolism flavoprotein 
Protein accessionYP_400561 
Protein GI81300353 
COG category[R] General function prediction only 
COG ID[COG4691] Plasmid stability protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0070081 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAGTC TGACCGTTCG GAACCTGAAA GAGTCAGTGA AGGCGTCGTT GCGGCTACGA 
GCAGCTCGCA ATCAACGCAG CTTAGAAGAG GAAGTCCGCA TCATTCTGGA GCAGGCGGTA
GAGCCAGAGG CTAGTGAGTT TGGGCTGGGG AGCCGCATTC ATCAACGGTT TTTAGGTTTA
GATGCAGACC AGATGGTCTT ACCGGATCGT CCTGTCGTGA CCCCAGAATC CTGCTTTGCT
GAGGATTGCT AG
 
Protein sequence
MASLTVRNLK ESVKASLRLR AARNQRSLEE EVRIILEQAV EPEASEFGLG SRIHQRFLGL 
DADQMVLPDR PVVTPESCFA EDC