Gene Synpcc7942_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1530 
Symbol 
ID3774954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1590283 
End bp1590708 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content50% 
IMG OID637799963 
Productmolybdenum-pterin binding domain-containing protein 
Protein accessionYP_400547 
Protein GI81300339 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3585] Molybdopterin-binding protein 
TIGRFAM ID[TIGR00638] molybdenum-pterin binding domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00438409 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCGCA AAGATCAAGG CTGGATTACC TTTCAGCTAC CCAGTGCTGA GCAACAACTT 
TTAGAGAACT ATTGCGAACA GACTCAACGA TCTAAAACCG ATGTTTTGCG TGAACTCGTG
CGATCGCTGC CATCAGCTTC AACGCCTTCC AATTCTGCAC CGACGTCACC AGCCTCCCAT
CATCAACCAG TCAGTCAAGA CGGACCTCGA CCGATGCGGG TCAGCGCTCG CAACGTCTTT
ACTGCTGTCA TTCGCCAGAT TCAGATGGGT CAGGTGAATG CAGAAGTTTT GTTAGAAATT
GCACCAAACG TCACAGTCGT TTCTGTCATC ACTCGGGCTT CTGTCGAAGG GCTACAACTA
CAAGTCGATC AGGAGGCCTA CACCATGATC AAATCCAGCG ATGTGATGGT TGCCCTGGAA
GATTAA
 
Protein sequence
MPRKDQGWIT FQLPSAEQQL LENYCEQTQR SKTDVLRELV RSLPSASTPS NSAPTSPASH 
HQPVSQDGPR PMRVSARNVF TAVIRQIQMG QVNAEVLLEI APNVTVVSVI TRASVEGLQL
QVDQEAYTMI KSSDVMVALE D