| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1529 |
|---|
| Symbol | |
|---|
| ID | 3774953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1589204 |
|---|
| End bp | 1590223 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637799962 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400546 |
|---|
| Protein GI | 81300338 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2327] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03609] polysaccharide pyruvyl transferase CsaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0032024 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCGT TGCTCTGTGG CTATTACGGA GAGGGCAATG GGGGAGATGA GGCGCTGTTG
GCAGCGCTGT TGCAACTCTT GCCGCCGACA GTGGAACCGC TGGTGCTGTC GGGGAATCCT
GCGGCAACTC GCACTTGCTA CGGCGTAGAA GCTTGCGATC GCCGATCGGG GGCTGCGGTT
TGGCAGGCAC TGCGACGCAG TGATCTATTC ATCTTTGGCG GCGGCAGCCT GATTCAAGAT
GTCACAAGCT GGACGAGCCC TCTCTACTAC TGCGGTCTGA TGGGGCTGGC ACAACAGTTA
GGTCTCAAAA CGATCGCCTG GGCCCAGGGC ATTGGGCCAC TGCAGCGCAA ACGAACCCGC
TGGTTGGCAC GCCGAACGTT TCAGCACTGC GATCGCATTA CAGTGCGCGA TCGCGGTTCT
GCTGCCTTGC TAAAAGAGTG GGGGATTTCT GTGGCGATTG CCCCGGATCC CGTTTGGGCT
TTAGAGCCGC TGCCTTTAGA TCAGCCGCTG TCGAACCAAG AGGCGATCGC GGTTTGTCTG
CGGCCCCACC CTGAGTTGAC GCCTGAGCGC AGCGATCGCT TGAAAGCTGC CCTGACAACT
CTGCAATCGC AAACCCAAGC ACCCATCCTG CTGATTCCCT TCCACCACCA GCAAGATCGA
CCACTGGCCG CGCAATGGGC AAGCGAAATT CCCCAAGCAG AAGTTTTGGA CTGGCAGCAT
CCGCGCCAGC TCCTCAGCTA CTTTCAGTCG GTGCGATTAA CGATCGCCAT GCGCTTCCAT
GGATTAGTGA TGGCAGCAGC GGCTGGAAAT CGTTGCTTTG GCCTCAGCTA TGACCCCAAA
GTGCGCCGTT TCCTGGATGC CCTTGAGCAA CCCGGCTGGG ATTTGCCGGA GATTCCAGAC
TCTGCTGAGG CGATCGCGGC CGCTTGGTTA GAGTCTTGGC AAGCAGAACC GATTCATGCC
GCTGCGATCG CGGACCTCCG TCAGCAAGTG GATGTCCATC GCCAGGCTTT AGTTTTTTGA
|
|---|
| Protein sequence | MRALLCGYYG EGNGGDEALL AALLQLLPPT VEPLVLSGNP AATRTCYGVE ACDRRSGAAV
WQALRRSDLF IFGGGSLIQD VTSWTSPLYY CGLMGLAQQL GLKTIAWAQG IGPLQRKRTR
WLARRTFQHC DRITVRDRGS AALLKEWGIS VAIAPDPVWA LEPLPLDQPL SNQEAIAVCL
RPHPELTPER SDRLKAALTT LQSQTQAPIL LIPFHHQQDR PLAAQWASEI PQAEVLDWQH
PRQLLSYFQS VRLTIAMRFH GLVMAAAAGN RCFGLSYDPK VRRFLDALEQ PGWDLPEIPD
SAEAIAAAWL ESWQAEPIHA AAIADLRQQV DVHRQALVF
|
|---|
| |