Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1528 |
Symbol | |
ID | 3774952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1588817 |
End bp | 1589146 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799961 |
Product | hypothetical protein |
Protein accession | YP_400545 |
Protein GI | 81300337 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.462653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00252515 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCACGCCT TATCTCTCCC CACTTGGGTC ATCCACATCT CCAGCGTGCT GGAATGGCTA CTGGCCATCC TCTACCTCTG GCGACTGGGG GAACAGGGCG ATCGCCGTTG GTTTGGACTG GCCGTCGCCA TGCTTCCAGC CCTGATTAGC GCTCTCTGTG CTTGCACGTG GCACTACTAC GACAACACGC CCAAACTGGA ATGGCTCGTA ACCCTGCAAG CCAGCACTAC CCTAGTCGGT AATTTCACGC TGATGCTGGC AGCCTATTGG TTTTGGCGAC CCGCCTCTAA ACAAGCCCCA GCATCGACAG CAGTACCTAA GCAACGCTAA
|
Protein sequence | MHALSLPTWV IHISSVLEWL LAILYLWRLG EQGDRRWFGL AVAMLPALIS ALCACTWHYY DNTPKLEWLV TLQASTTLVG NFTLMLAAYW FWRPASKQAP ASTAVPKQR
|
| |