Gene Synpcc7942_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1528 
Symbol 
ID3774952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1588817 
End bp1589146 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content57% 
IMG OID637799961 
Producthypothetical protein 
Protein accessionYP_400545 
Protein GI81300337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.462653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00252515 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGCCT TATCTCTCCC CACTTGGGTC ATCCACATCT CCAGCGTGCT GGAATGGCTA 
CTGGCCATCC TCTACCTCTG GCGACTGGGG GAACAGGGCG ATCGCCGTTG GTTTGGACTG
GCCGTCGCCA TGCTTCCAGC CCTGATTAGC GCTCTCTGTG CTTGCACGTG GCACTACTAC
GACAACACGC CCAAACTGGA ATGGCTCGTA ACCCTGCAAG CCAGCACTAC CCTAGTCGGT
AATTTCACGC TGATGCTGGC AGCCTATTGG TTTTGGCGAC CCGCCTCTAA ACAAGCCCCA
GCATCGACAG CAGTACCTAA GCAACGCTAA
 
Protein sequence
MHALSLPTWV IHISSVLEWL LAILYLWRLG EQGDRRWFGL AVAMLPALIS ALCACTWHYY 
DNTPKLEWLV TLQASTTLVG NFTLMLAAYW FWRPASKQAP ASTAVPKQR