Gene Synpcc7942_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1526 
Symbol 
ID3774950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1585287 
End bp1586078 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content56% 
IMG OID637799959 
Producthypothetical protein 
Protein accessionYP_400543 
Protein GI81300335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000921753 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGCTA TTATCCTCGC TGCAATAACT GCGATCGCGG CGATCGTGCT CTATTTCGTG 
CGCCGTCATT ACCGGTTCAA GCTGCAGAGC CTGCTATTGG CCCAGCCCGC GACCAGTCTG
CAGCTCAAGG AAATTGCTGA GCATGTAGCT GGTGAAATTG GGGGAGGAAA TCTGCGCCAG
TACGTCAAAA TGTGGGGCGC GATCGAGGTA GAGCAGCCCT TAGTTTCTGA ATTAAAACAA
GAGTCCTGCG TCTACTACTG CTCCACTGTC AGCCGCGAAT ATGAAGAGCG CGTTCGCAAG
GAGGATAGTG AGGGCAAGGT GACTTGGACG ACGGAACGCC GCTCGGAAAC GATCAGCCAG
AACCGTCGCA GCACGCCTTT TTACCTGCGC GATCAGCATG GACGGGTGCG GGTTGAGCCG
GAGTCGGCTG CGATCGCAAC GATTCCTGTC TTAGATGAGT TTCGCCCAGA CAGCTCGGCT
AGCAGCTTAA TTTTTGGGGC CTTCTCCCTC AGCCTGTCGA CCACCGCTGG TTTGGGTAAA
ACCTTGGGCT ATCGCTACCG TGAGGAGATT TTGCCCTGCG ATCGCTCGGT GCTTGTTGTC
GGTGCTGCCA GTGATGAAAC GGGTGAATTG ACCCTCGGAC CGAGCAGCGA AGCGCGGCAG
CAGTTTTTCA TTGCGCTGAA GCCTGAGACG GCTTTATTAC AAGAGGTCAA ACAAACCATC
CAATGGCTGA CGATTGGGGC GATCGCGAGT GTTGTTGTGA CGGTGGTCGC TGCGATCGCG
GCGCTGCTCT AG
 
Protein sequence
MAAIILAAIT AIAAIVLYFV RRHYRFKLQS LLLAQPATSL QLKEIAEHVA GEIGGGNLRQ 
YVKMWGAIEV EQPLVSELKQ ESCVYYCSTV SREYEERVRK EDSEGKVTWT TERRSETISQ
NRRSTPFYLR DQHGRVRVEP ESAAIATIPV LDEFRPDSSA SSLIFGAFSL SLSTTAGLGK
TLGYRYREEI LPCDRSVLVV GAASDETGEL TLGPSSEARQ QFFIALKPET ALLQEVKQTI
QWLTIGAIAS VVVTVVAAIA ALL