Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1526 |
Symbol | |
ID | 3774950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1585287 |
End bp | 1586078 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799959 |
Product | hypothetical protein |
Protein accession | YP_400543 |
Protein GI | 81300335 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000921753 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGCTA TTATCCTCGC TGCAATAACT GCGATCGCGG CGATCGTGCT CTATTTCGTG CGCCGTCATT ACCGGTTCAA GCTGCAGAGC CTGCTATTGG CCCAGCCCGC GACCAGTCTG CAGCTCAAGG AAATTGCTGA GCATGTAGCT GGTGAAATTG GGGGAGGAAA TCTGCGCCAG TACGTCAAAA TGTGGGGCGC GATCGAGGTA GAGCAGCCCT TAGTTTCTGA ATTAAAACAA GAGTCCTGCG TCTACTACTG CTCCACTGTC AGCCGCGAAT ATGAAGAGCG CGTTCGCAAG GAGGATAGTG AGGGCAAGGT GACTTGGACG ACGGAACGCC GCTCGGAAAC GATCAGCCAG AACCGTCGCA GCACGCCTTT TTACCTGCGC GATCAGCATG GACGGGTGCG GGTTGAGCCG GAGTCGGCTG CGATCGCAAC GATTCCTGTC TTAGATGAGT TTCGCCCAGA CAGCTCGGCT AGCAGCTTAA TTTTTGGGGC CTTCTCCCTC AGCCTGTCGA CCACCGCTGG TTTGGGTAAA ACCTTGGGCT ATCGCTACCG TGAGGAGATT TTGCCCTGCG ATCGCTCGGT GCTTGTTGTC GGTGCTGCCA GTGATGAAAC GGGTGAATTG ACCCTCGGAC CGAGCAGCGA AGCGCGGCAG CAGTTTTTCA TTGCGCTGAA GCCTGAGACG GCTTTATTAC AAGAGGTCAA ACAAACCATC CAATGGCTGA CGATTGGGGC GATCGCGAGT GTTGTTGTGA CGGTGGTCGC TGCGATCGCG GCGCTGCTCT AG
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Protein sequence | MAAIILAAIT AIAAIVLYFV RRHYRFKLQS LLLAQPATSL QLKEIAEHVA GEIGGGNLRQ YVKMWGAIEV EQPLVSELKQ ESCVYYCSTV SREYEERVRK EDSEGKVTWT TERRSETISQ NRRSTPFYLR DQHGRVRVEP ESAAIATIPV LDEFRPDSSA SSLIFGAFSL SLSTTAGLGK TLGYRYREEI LPCDRSVLVV GAASDETGEL TLGPSSEARQ QFFIALKPET ALLQEVKQTI QWLTIGAIAS VVVTVVAAIA ALL
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