| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1525 |
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| Symbol | |
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| ID | 3774949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1583407 |
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| End bp | 1585200 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637799958 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_400542 |
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| Protein GI | 81300334 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00490404 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCTCC CCATTCGCAA CGTCGCGATC ATTGCCCACG TTGACCACGG CAAAACAACC
TTGGTTGACG CCTTGCTCAA ACAATCTGGC ATTTTCCGTG AGGGCGAAGA CGTTCCGGAT
TGCGTCATGG ACTCCAATGA TTTGGAGCGG GAACGGGGCA TTACCATTCT TTCTAAAAAT
ACAGCGGTCA AATACAAGGA CACGCTGATC AATATTGTCG ATACGCCCGG TCACGCGGAC
TTCGGTGGTG AAGTCGAGCG GGTTCTCGGC ATGGTGGATG GCTGCATCCT GATTGTGGAT
GCCAACGAAG GCCCGATGCC CCAAACGCGA TTTGTGCTGA AAAAAGCGTT GGAAAAAGGG
CTGCGGCCGA TCGTTGTTGT GAACAAAATC GATCGCCCTC GCGCTGAGCC GATGGTTGCT
GTCGATAAGG TTCTCGATCT GTTCCTCGAA CTCGGCGCCG ACGATGACCA GTGCGAATTT
CCCTACCTCT TTGCTTCGGG CTTGAGCGGT TTTGCGAAAG AGTCTTTGGA AGATGAAAGC
AAGGACATGC AACCGCTGTT CGATGCAATT TTGCGCCATG TTCCACCCCC GATTGGGGAT
GTGAGCAAGC CCTTGCAGCT GCAGGTGACG ACCCTCGATT ATTCAGACTT CTTGGGTCGG
ATTGTGATCG GTAAGATCCA CAACGGCACG ATCAACATGG GTCAGCCGAC TGCTCTGCTC
AAGGAAGATG GCAGCGTGGT GCGGGGTAAA GTGACCAAGC TGCTGGGCTT TGAGGGCCTG
AAGCGGATTG AAATTGAGCA AGCGACCGCC GGCATGATTG TGGCCGTCGC GGGCTTTGCT
GATGCCAACA TTGGTGAAAC CCTGGCTTGT CCCAACGAAC CTTTGGCGCT GCCGCTGATC
AAGGTTGACG AGCCAACCCT GCAGATGACC TTCTGCGTCA ATGACTCACC TTTTGCTGGC
AAAGAAGGCA AGTTTGTCAC CAGCCGCCAA GTCCGCGATC GCCTGTTGCG TGAGCTGGAA
ACCAACGTGG CCCTGCGGGT CGAAGAAACC GATTCTCCCG ATCGCTTCAT GGTCTCGGGG
CGGGGTGAAC TACACCTCGG CATTCTGATC GAAACGATGC GTCGCGAAGG TTATGAGTTC
CAAGTGTCGC AGCCGCAGGT GATCTTCCGG GAAGTCAATG GTCAGCCGGG CGAACCGTTT
GAAACGCTCG TGATGGATGT GCCCGACGAT GCGGTCGGCA GCGTGATCGA GCGCTTGGGC
ACCCGCAAAG CGGAAATGCA AAACATGGAA GCTGTCGGTA ATGGCCGTAC GATTCTGGAG
TTTGTGATTC CGGCGCGCGG TCTGATTGGC TTCCGGGGCG ACTTTATCCG CCTCACCCGT
GGCGAAGGGA TCATGAACCA CTCCTTCTTG GAGTACCGTC CTTTCTGTGG CGATCTGGAA
ATGCGCCGCA ACGGTGTGCT GATTGCCTTT GAAGAGGGGA CAGCGACTTT CTACGCCCTC
AAGAACGCCG AAGATCGCGG TGCTTTCTTC ATTGAACCGG GCACCAAGGT CTATAAGGGC
ATGATTGTTG GCGAGCATAA CCGGCCCCAA GATTTGGAGC TGAACGTTTG CAAAACCAAG
GCACTGACCA ACCACCGCTC GGCTACAGGC GATGAACTGG TACAGCTGCA AACGCCAATT
CAAATGACCT TGGAACGGGC GCTGGAGTAC ATCGGTTCCG ATGAACTGCT GGAAGTGACG
CCCGAGTCGA TCCGTCTGCG GAAGCTACTG GCGAAGAAAC TCGCTAAGCG TTAG
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| Protein sequence | MSLPIRNVAI IAHVDHGKTT LVDALLKQSG IFREGEDVPD CVMDSNDLER ERGITILSKN
TAVKYKDTLI NIVDTPGHAD FGGEVERVLG MVDGCILIVD ANEGPMPQTR FVLKKALEKG
LRPIVVVNKI DRPRAEPMVA VDKVLDLFLE LGADDDQCEF PYLFASGLSG FAKESLEDES
KDMQPLFDAI LRHVPPPIGD VSKPLQLQVT TLDYSDFLGR IVIGKIHNGT INMGQPTALL
KEDGSVVRGK VTKLLGFEGL KRIEIEQATA GMIVAVAGFA DANIGETLAC PNEPLALPLI
KVDEPTLQMT FCVNDSPFAG KEGKFVTSRQ VRDRLLRELE TNVALRVEET DSPDRFMVSG
RGELHLGILI ETMRREGYEF QVSQPQVIFR EVNGQPGEPF ETLVMDVPDD AVGSVIERLG
TRKAEMQNME AVGNGRTILE FVIPARGLIG FRGDFIRLTR GEGIMNHSFL EYRPFCGDLE
MRRNGVLIAF EEGTATFYAL KNAEDRGAFF IEPGTKVYKG MIVGEHNRPQ DLELNVCKTK
ALTNHRSATG DELVQLQTPI QMTLERALEY IGSDELLEVT PESIRLRKLL AKKLAKR
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