| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1514 |
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| Symbol | |
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| ID | 3774938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1564750 |
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| End bp | 1565349 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799947 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_400531 |
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| Protein GI | 81300323 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.843798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCTATC GCTATCTGCT GTTTCACAAG CCCTACGATG TGCTCTGCCA GTTCAGTCCA
AGCGATCGCC CCGATCAGCA GACCCTGAAG GACTACATCG ATGTGCCTGA GGTCTATCCG
GTCGGTCGCC TCGATCGCGA TAGTGAGGGG TTGTTACTAC TGACCAACAA TGGGGCACTG
CAGCATCGTC TTTGCCATCC GCGCTTTGGT CACGATCGCA CCTATTGGGT GCAAGTCGAA
CGGGAACCGA CCGAGGCAGC GCTGCAGGCT CTGCGTCAAG GAGTGCAAAT TCAGGATTAT
CGAACCCGCC CCGCCAAAGT GCAGCGATTG GACGACCCTC AGATTCCCGA GCGGGACCCC
CCGATTCGCT TCCGCAAAAC CGTCCCGACG GCATGGCTGG CCCTGACTCT ACAGGAAGGA
CGCAATCGCC AAGTACGGCG GATGACCGCT GCAGTGGGCC ATCCAACGCT ACGCTTGATA
CGAGCAGCGA TCGCTACCCA TCCGGATCAA CCACCCCTTC AGTTGCAGGG GCTCGCCCCC
GGAACCTGGC GAGACTTAAC GGCGATCGAG TGCCGTCGAC TCGAATCCCT TCTACGATAG
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| Protein sequence | MVYRYLLFHK PYDVLCQFSP SDRPDQQTLK DYIDVPEVYP VGRLDRDSEG LLLLTNNGAL
QHRLCHPRFG HDRTYWVQVE REPTEAALQA LRQGVQIQDY RTRPAKVQRL DDPQIPERDP
PIRFRKTVPT AWLALTLQEG RNRQVRRMTA AVGHPTLRLI RAAIATHPDQ PPLQLQGLAP
GTWRDLTAIE CRRLESLLR
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