| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1512 |
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| Symbol | |
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| ID | 3774936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1561944 |
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| End bp | 1563389 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799945 |
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| Product | zeta-carotene desaturase |
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| Protein accession | YP_400529 |
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| Protein GI | 81300321 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02732] carotene 7,8-desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.311968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTG CCATTGTCGG TGCTGGTTTG GCCGGTCTCG CCGCTGCCAT TGACCTCGTG
GATGCTGGAC ACCAAGTTGC GATCTACGAC TCTCGTCCCT TTGTCGGTGG CAAAGTCGGT
AGCTGGATCG ATGCTGATGG CAACCACATT GAAATGGGGC TGCACGTCTT CTTCTTCAAC
TACGCCAACC TCTTCGCCCT GATGCGCAAA GTGGGGGCCT TCGAGAATCT ACTGCCAAAA
GCCCATACCC ACACCTTCAT CAACAAAGGC GGCGAAGTCG GTGAGCTGGA TTTCCGCTTC
CCGATCGGCG CTCCTTTCAA TGGCCTCAAG GCCTTCTTCA CCACCAGCCA ACTGACCTGG
CTGGACAAGC TGCAAAACGC ACTGGCACTG GGCACTAGCC CCCTCGTGCG CGGCATCCTT
GACTACGAAG GGGCGATGAA AATCATCCGT GCCCTTGATC GGATCAGCTT TGCCGATTGG
TTCCGCAGTC ACGGCGGCAG CGAAGGCAGC CTCAAACGGA TGTGGAACCC GATCGCCTAT
GCCCTAGGCT TCATCGATAC CGAGAACATT TCAGCGCGCT GCATGCTGAC GGTCTTCCAG
ATGTTCGCCG CAAAGACTGA AGCCTCGAAA CTGAATCTGT TGGCAGGCTC TCCGGCGGAA
TATTTGCACA AGCCGATTCT GGACTACATC CAAGCGCGAG GGGCAACGCT GCACCTGCGG
CGACGGGTGC GGGAGATTGA ATATACGGAA ACCAACGGTC AAACCGTGGT CACAGGTCTA
CAGATCGCTG ACGGTGATGC CGTGGAACGG GTGGAAGCAG ATGTGTATCT GGCGGCCTGC
GATGTGCCGG GAATTCAGCG TTTGCTGCCG GAGGCCTGGC GCAAGTGGTC GGAGTTCGAC
AACATCTACA AGCTGGATGC GGTGCCGGTC GCGACGGTGC AACTGCGCTT CGATGGCTGG
GTGACCGAGC TGGGCGATCG CGAAAAACGG CACCAACTCG ACCATGCGAC TGGCCTCGAT
AACCTGCTCT ACACCGCTGA CGCCGATTTC TCTTGCTTTA CTGACCTCGC CCTGAGTAGT
CCCAAGGACT ACTACCGCAA AGGCCAAGGA TCCCTCTTGC AATGCGTTCT AACACCCGGC
GATCCCTTCA TTGCCATGAA GAACGAAGAC ATCGCTCAGC ATGTGCTCAA GCAAGTGCAT
GAGCTCTTCC CCAGCAGCCG CGATCTCAAT ATGACTTGGT CCAATGTAGT CAAGTTGGCG
CAATCGCTCT ATCGGGAGGC ACCGGGCATG GATCCATTCC GCCCTGATCA AAAAACCCCG
ATCGCTAACT TCTTCCTGGC CGGCAGCTAC ACGCAGCAGG ACTACATCGA TAGCATGGAG
GGAGCCACGA TTTCGGGACG CCGGGCCGCC AAAGCAATGT TAGAAGCTCA GGCGATCGCT
GCGTAA
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| Protein sequence | MRVAIVGAGL AGLAAAIDLV DAGHQVAIYD SRPFVGGKVG SWIDADGNHI EMGLHVFFFN
YANLFALMRK VGAFENLLPK AHTHTFINKG GEVGELDFRF PIGAPFNGLK AFFTTSQLTW
LDKLQNALAL GTSPLVRGIL DYEGAMKIIR ALDRISFADW FRSHGGSEGS LKRMWNPIAY
ALGFIDTENI SARCMLTVFQ MFAAKTEASK LNLLAGSPAE YLHKPILDYI QARGATLHLR
RRVREIEYTE TNGQTVVTGL QIADGDAVER VEADVYLAAC DVPGIQRLLP EAWRKWSEFD
NIYKLDAVPV ATVQLRFDGW VTELGDREKR HQLDHATGLD NLLYTADADF SCFTDLALSS
PKDYYRKGQG SLLQCVLTPG DPFIAMKNED IAQHVLKQVH ELFPSSRDLN MTWSNVVKLA
QSLYREAPGM DPFRPDQKTP IANFFLAGSY TQQDYIDSME GATISGRRAA KAMLEAQAIA
A
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