| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1510 |
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| Symbol | |
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| ID | 3774934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1560399 |
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| End bp | 1561178 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637799943 |
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| Product | RNA polymerase sigma factor SigF |
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| Protein accession | YP_400527 |
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| Protein GI | 81300319 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.252982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGAAC CTCTCTCCTC TGACCCCCGC CGACAAACGT TTCTGTTGCT ACGGCAGTAT
CAACAGACGC GTGATCATCG AATTCGGAAT CGACTCGTTG AGCTGAATTT GGGGTTGGTG
CGTCAGGAAG CCTACCGCTG GGTGCAACGC TGCCCCGAAA GCTTTGAGGA GCTTGTGCAG
ATTGGATCCT TGGGGTTAAT TGCGGCGATC GATCGCTTTG AACTGGAGCG GGGTAAAGCA
TTTAGTTCGT TCGCAGTACC CTATATCCGC GGCGAGATTC AACACTATCT GCGCGATCGC
AGTGGCACTG TGCGAGTACC CCGGCGCTGG GCCGAACTTC ATCAGCAAAT TGACCCCCTC
CGCCATAAAC TCCAGCGTGA ACTAGGGCGA TCACCCACGG AGGAAGAGCT GCGCCAGGGC
TTGGGCTTGG ATGCTGAGGA ATGGCAAGAG GTGCGTCTGA TTGGCCGCAA TCGCACCACT
CTCAGCCTCG ACCAGCCGTT GTACGCCGAT GAGGAGCAGG TCACAAGCCT CGGCGACTCG
ATCGCAGATC CGAAATATCG CAGTTTTCAG CTTGCCGAAG AGGATCGGAT TCGACTCCAG
CAAGCAATGC AGCTGCTCGA GCAGAGAACT CGTGAAATTC TCGAGTTTGT CTTTTTCTAT
GACCTGACCC AGCGCGAGGT TGCTGAAAAA CTCGGTCTGA GCGCGGTCAC AGTGTCGCGC
CAAGTCAAAA AGGGGCTCAA GCACCTCAAA TCGATTCTGC GCAGTGGCGA TGATGCCTAG
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| Protein sequence | MGEPLSSDPR RQTFLLLRQY QQTRDHRIRN RLVELNLGLV RQEAYRWVQR CPESFEELVQ
IGSLGLIAAI DRFELERGKA FSSFAVPYIR GEIQHYLRDR SGTVRVPRRW AELHQQIDPL
RHKLQRELGR SPTEEELRQG LGLDAEEWQE VRLIGRNRTT LSLDQPLYAD EEQVTSLGDS
IADPKYRSFQ LAEEDRIRLQ QAMQLLEQRT REILEFVFFY DLTQREVAEK LGLSAVTVSR
QVKKGLKHLK SILRSGDDA
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