| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1505 |
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| Symbol | |
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| ID | 3773678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1554839 |
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| End bp | 1555936 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799938 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_400522 |
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| Protein GI | 81300314 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0654454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT CCTATCGGAT TACCCTGCTT CCTGGCGATG GCATCGGTCC CGAGATTATG
GCAGTGACCG TTGACATCCT GCGGGCAATC GGTCGCCAGT TTGACCTCAA CTTTGAATTT
GAGGAAGCAC TGATCGGCGG ATCGGCAATC GATGCCACCG GTGAGCCCCT GCCTGAAGCC
ACGTTGGCGA CCTGTCGCAA CAGTGATGCT GTCCTACTGG CTGCGATCGG GGGCTACAAG
TGGGATTCCT TGCCGCGATC GCAGCGTCCG GAAACCGGTC TTTTAGGTCT GCGAGCTGGC
TTAGGTCTGT TTGCCAATCT GCGGCCCGCC GCAATTTTGC CTCAATTGGT TGATGCCTCC
TCCCTCAAAC GGGAAGTGAT CGAAGGCGTC GATTTGATGG TGGTGCGAGA ACTGACCGGC
GGCATTTACT TTGGGGAACC TAAAGGCTGC TTCGCCGATG AACAGGGACG ACAGCGAGCT
TTCAACACCA TGGTCTACCG CGAGGATGAG ATTGATCGCA TTGGCCGAGT TGCCTTTGAC
ATTGCCCGCA AACGGGGCAA ACGTCTTTGC TCGGTGGATA AGGCAAATGT GCTCGAGGTC
TCCCAACTCT GGCGCGATCG GATGACGCTC TTGGGCAGCG ACTACGCTGA TGTGGAGCTC
AGCCACCTCT ACGTTGATAA CGCCGCCATG CAGTTGGTGC GTTGGCCCAA GCAGTTCGAC
ACCATCGTCA CGGGCAATCT TTTTGGGGAT ATCCTTTCGG ACATTGCGGC AATGCTGACG
GGTAGCATTG GCATGCTGCC GTCTGCCAGC TTGGGTGCCG AAGGCCCCGG CGTTTTTGAA
CCGGTACATG GCTCTGCACC TGACATCGCT GGTCAAGACA AAGCCAACCC CCTCGCTCAA
GTGTTGAGCG CAGCTATGAT GTTGCGCTAC GGCTTGGATG AGCCGGAAGC TGCTGCCCGC
ATTGAAGCTG CTGTCAACCA AGTGCTCGAT CAGGGCTACC GAACTGGCGA TCTGTATTCC
GAAGGAATGA CTCTTGTGGG CTGCAAAGGC ATGGGCGATG CTCTACTGGC AGCTTTAGAA
TCTCCCGTCT CTGCCTAG
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| Protein sequence | MTRSYRITLL PGDGIGPEIM AVTVDILRAI GRQFDLNFEF EEALIGGSAI DATGEPLPEA
TLATCRNSDA VLLAAIGGYK WDSLPRSQRP ETGLLGLRAG LGLFANLRPA AILPQLVDAS
SLKREVIEGV DLMVVRELTG GIYFGEPKGC FADEQGRQRA FNTMVYREDE IDRIGRVAFD
IARKRGKRLC SVDKANVLEV SQLWRDRMTL LGSDYADVEL SHLYVDNAAM QLVRWPKQFD
TIVTGNLFGD ILSDIAAMLT GSIGMLPSAS LGAEGPGVFE PVHGSAPDIA GQDKANPLAQ
VLSAAMMLRY GLDEPEAAAR IEAAVNQVLD QGYRTGDLYS EGMTLVGCKG MGDALLAALE
SPVSA
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