Gene Synpcc7942_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1502 
Symbol 
ID3773675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1551742 
End bp1552302 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content59% 
IMG OID637799935 
Producthypothetical protein 
Protein accessionYP_400519 
Protein GI81300311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.396292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCATG CTCGCAAGCG GCGAATTCTG CAACCCAACC CCGAACCTAT GACCTACCTG 
ATTGCTGTTT TGCGCGATCG CCCCACGGTG GAAGCAGCCT GCGCTGCTTT GGCTGAAACC
GGCTGGTCAA GCGACTTCTG GAGCGTGGTG GGTGAAGGCT GGGAAAGTAG CGATCGCTTC
GGTTTGCTCA ATCCTAAGCA GCGATCGCGG CAACGGGTGC GCTGGATGGC GACTTGGCTG
GTGCCCTTTG GTTTTGCAGG TGGTTTGGTC TTCAGCAAAA TTACGGGGCT AGAAACCTTT
GCTTGGGCAG GGCCAGTCGG CAATGACCTC GTGGGGGGCG TGCTAGGTGC CTTGTCGGGC
TTGATGGGCA GCGCTTTCAT CGGTGGTGGT TTCGGCGTTG GTAACCTGTC GGGTTTTGAT
CCGCTGCCAT TCCGCAATCG GCTTGAGGAA GGCAAGTTCG TGCTGATTCT GCGGGGCAAC
GATGCTGTGA CCACTCAAGC CTGGCGTCTG CTGCGATCGG TCAATCCGGA GTCCTTGCAA
ACCGTCGAGG AGAGTCTGTA G
 
Protein sequence
MPHARKRRIL QPNPEPMTYL IAVLRDRPTV EAACAALAET GWSSDFWSVV GEGWESSDRF 
GLLNPKQRSR QRVRWMATWL VPFGFAGGLV FSKITGLETF AWAGPVGNDL VGGVLGALSG
LMGSAFIGGG FGVGNLSGFD PLPFRNRLEE GKFVLILRGN DAVTTQAWRL LRSVNPESLQ
TVEESL