| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1487 |
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| Symbol | rpsD |
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| ID | 3773659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1536986 |
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| End bp | 1537594 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799919 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_400504 |
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| Protein GI | 81300296 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCGAT ATAGAGGCCC ACGCCTCAGA ATTGTACGGC GCTTGGGGGA CCTACCTGGT
CTCACCCGTA AGGCTGCTCG TCGGTCTTAC CCCCCTGGTC AGCACGGCCA AGCCCGGCGC
AAGCGCTCCG AGTACGCGAT TCGTCTTGAA GAAAAGCAAA AGCTTCGCTT CAATTACGGC
TTGTCGGAAC GACAACTGGT TCGCTACGTC AAGAAGGCGC GCCGGATGCA AGGGTCCACT
GGGACCAACT TGCTGCAGCT GCTCGAAATG CGCCTGGACA ACTTGGTCTT CCGCCTTGGC
TTTGCACCCA CCATCCCCGG TGCTCGTCAG CTGGTTAACC ACGGTCACGT GACGGTCAAT
GGCCGCGTGG TGGATATCGC CAGCTATAAC TGCCGCCCCG GTGAAGTGAT CGGGGTTCGT
CAGCGCGAAG CGTCTCGCAA GTTGGTCACT GCCAACTTGG AATACCCTGG CCTCGCCAAC
GTGCCGGTTC ACCTCGACTT CGATAAGAAC AAACTCGAAG CCAAGGTCAC GGGAGCCTGC
GAGCGCGAAT GGGTTGCGCT GCAAATCAAT GAACTACTGG TGGTCGAGTA CTACTCGCGC
AAAGTGTAG
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| Protein sequence | MSRYRGPRLR IVRRLGDLPG LTRKAARRSY PPGQHGQARR KRSEYAIRLE EKQKLRFNYG
LSERQLVRYV KKARRMQGST GTNLLQLLEM RLDNLVFRLG FAPTIPGARQ LVNHGHVTVN
GRVVDIASYN CRPGEVIGVR QREASRKLVT ANLEYPGLAN VPVHLDFDKN KLEAKVTGAC
EREWVALQIN ELLVVEYYSR KV
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