Gene Synpcc7942_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1484 
SymbolmurE 
ID3773656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1534874 
End bp1536367 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content58% 
IMG OID637799916 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_400501 
Protein GI81300293 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC GATCGCTGCT CGCTTCAACC CCGACCCAGG TCCTCCAACC GCAACATGCC 
GCCTTAGATT TAGCCATTAC CGGCCTCCAA ACTGACTCCC GTCGCTGTCA ACCCGGCGAT
CTGTTTCTGG GAATGCCGGG CACCCAAGTC GATGGCGGTC AATTTTGGCC CGAAGCAATC
GCGGCGGGGG CAGTGGCTGT GATCGTGACA CCTACGGCGC TAGCCCAACG GCCACTCTCG
GCCAACCCAG AGGCCTGCCT AATCTTGAGC GATCAAATGC CGGTGACGGC TGGGGCGATC
GCGGCAGCCT TCTACAACCA ACCGGCGCAG ACCCTCAAGT TAATCGGAGT GACCGGCACG
AATGGCAAAA CGACAACCAC CCATCTAGTT GAGCATTTTC TCAACGCTGC CGACACGAAA
ACCGCCCTCC TAGGCACGCT TTATAACCGC TGGCCCGGCT ATTCCGAAGT GGCGCAACAT
ACAACGCCTT TTGCCACGGA TTTGCAGGCT CAACTGGCGA CGGCAGTAGA CGCAGGTTGC
CAAGCTGCTG TCATGGAAGT TAGTTCCCAC GCACTCGATC AAGGTCGGGT CAACGGTTGC
GGCTTTGATG TTGCCGTCTT CACGAACCTG ACCCAAGATC ACTTGGATTA TCACGGGACG
ATGGAGGCCT ACTTTGCGGC CAAAGCCAGA TTGTTTGCGC CGCCCTATCT GCGCGGCAAA
GCAGTGATCA ACGCCGACGA TGCCTACGGT CAGCGCTTGA TTACGATGAC ACCACCCGGG
CAATGTCTGA CTTACAGCGT TGTGGGAACA GCGGACTTTT GCACGACTGA TTTGCAGTAC
GGGCCTACCG GAGTTGAAGG CACGATTAAG ACGCCAGATG GTGCTTTTCC CTTCCGATCG
CCTCTGGTCG GTCAGTTCAA TCTCGCGAAC CTGTTAGGGG CGATCGCTGC GGGTTGGACC
TTGGGCCTGC CGATCGAGAC AATGCTGGCC GTCGTCCCTG ACTTTGTTGG CGTACCCGGT
CGGATGGAAC GGGTCGTGGG TCAAGACAGC GATCCGACGG TGATCGTCGA CTATGCCCAC
ACGCCCGACA GTCTCGAAAA TCTCCTAAAA GCGGCTCGTC CATTCATTCA AGGTGAGCTG
ATCTGTGTGT TTGGCTGTGG CGGCGATCGC GATCGCACCA AACGTCCTCT GATGGGAGAA
ATTGCGGCAC GACTGGCCGA TCGCGTCATT ATTACTTCCG ACAACCCGCG CACCGAAGAT
CCGCGCCAGA TTTTGGCGGA TATTGTGGCG GGCATTCCGG CTGCCAGTCC GGTGGTGGTT
GAAGCCGATC GCGCAGCAGC GATTCGTCAG GCGATTCTCT CAGCTCAGCC CGGTGATGGG
GTGCTCTTGG CGGGCAAAGG CCACGAAGAC TATCAGATTC TTGGCACGAC CAAAATTCAC
TTCGACGATC GCGAGCAGGC GCGGTTGGCC TTGGCCGAGC GTCAGTCTGC ATGA
 
Protein sequence
MNLRSLLAST PTQVLQPQHA ALDLAITGLQ TDSRRCQPGD LFLGMPGTQV DGGQFWPEAI 
AAGAVAVIVT PTALAQRPLS ANPEACLILS DQMPVTAGAI AAAFYNQPAQ TLKLIGVTGT
NGKTTTTHLV EHFLNAADTK TALLGTLYNR WPGYSEVAQH TTPFATDLQA QLATAVDAGC
QAAVMEVSSH ALDQGRVNGC GFDVAVFTNL TQDHLDYHGT MEAYFAAKAR LFAPPYLRGK
AVINADDAYG QRLITMTPPG QCLTYSVVGT ADFCTTDLQY GPTGVEGTIK TPDGAFPFRS
PLVGQFNLAN LLGAIAAGWT LGLPIETMLA VVPDFVGVPG RMERVVGQDS DPTVIVDYAH
TPDSLENLLK AARPFIQGEL ICVFGCGGDR DRTKRPLMGE IAARLADRVI ITSDNPRTED
PRQILADIVA GIPAASPVVV EADRAAAIRQ AILSAQPGDG VLLAGKGHED YQILGTTKIH
FDDREQARLA LAERQSA