Gene Synpcc7942_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1483 
Symbol 
ID3773655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1534449 
End bp1534877 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content57% 
IMG OID637799915 
Producthypothetical protein 
Protein accessionYP_400500 
Protein GI81300292 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG GACTGGCTGC CTTCGGCGGA CGGGCCGCCT TAGAGCTACT CGCCGAAAAT 
GACTGGGCGG TCGCCTTCCG CGATCGCTAT CCCGTCTCGC CAGGTCATAG TCTGGTGGTT
CCGAAACGAG CCGTTGGATC GCTGTTTGAG TTACCCACTG CGGAATTTCA GGCTAGTTGG
GAACTCGTTG CGATCGTGCG ATCGCTACTC CAACAGCAAT ATCAACCCGC TGGTTTCAAT
GTGGGCCTCA ATGACGGTCT GGCTGCTGGT CAAACGATCG ACCAAGCCCA CATCCACCTG
ATTCCCCGTT ACAGCGGCGA TCGCCCCGAT CCTCGTGGGG GCATTCGCTG GGTCTTGCCC
GAACACGCCG CCTACTGGTC ATCGCAGTCT GCAATTGGGT TAGGACTATC TGATAAAGAA
ATTGGTTGA
 
Protein sequence
MSNGLAAFGG RAALELLAEN DWAVAFRDRY PVSPGHSLVV PKRAVGSLFE LPTAEFQASW 
ELVAIVRSLL QQQYQPAGFN VGLNDGLAAG QTIDQAHIHL IPRYSGDRPD PRGGIRWVLP
EHAAYWSSQS AIGLGLSDKE IG