Gene Synpcc7942_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1480 
Symbol 
ID3773652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1531194 
End bp1531748 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content60% 
IMG OID637799912 
Producthypothetical protein 
Protein accessionYP_400497 
Protein GI81300289 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC GTCTTTCGGG CCGGCGATCG CTGCAAACCC CTGCAGGTTT GGGAACCCGA 
CCGACCCCTT CCCGGGTACG CAACGCTATC TTCAACGTCT GGCAATTTGC AGTTCCTGAC
TGCCGTTGGC TCGATCTCTG TGCCGGCAGC GGCGCTATGG GTGGCGAGGC ACTCCTCCGA
GGGGCCAGCG TGGTGTGGGG CATTGAGCAG TCTGCCCAGG CCTGTCGGGC GATCGCCCAG
AACTGGCAGA AATTACAGGC GCCTGATCAA GAAGTACGGC TGTTAAAAGG GGAGATCTGT
CGCCTGCTGG CTAGTCTGGA TGCCCCAGCC TTTGACTTGA TCTACTTCGA CCCGCCCTAC
GACGGTGATC TGTACGAACC CGTCCTGGCT CTCTTAGCGG AGCGATCGCT CTTGCACGAG
CAGGGAGAGA TTGCTGTTGA GCATCGTCCC GATCGGGCGA TCGCCCTTCC TCCCAATTTT
GAACTCAAGC AATGCCGTCG CTACGGCAGT ACGGCAGTCA GCCTGATCAC TTGGGCTGTT
CCCCAGAAGG ACTAA
 
Protein sequence
MSIRLSGRRS LQTPAGLGTR PTPSRVRNAI FNVWQFAVPD CRWLDLCAGS GAMGGEALLR 
GASVVWGIEQ SAQACRAIAQ NWQKLQAPDQ EVRLLKGEIC RLLASLDAPA FDLIYFDPPY
DGDLYEPVLA LLAERSLLHE QGEIAVEHRP DRAIALPPNF ELKQCRRYGS TAVSLITWAV
PQKD