Gene Synpcc7942_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1478 
Symbol 
ID3773650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1530415 
End bp1530852 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content57% 
IMG OID637799910 
Productcytochrome CytM 
Protein accessionYP_400495 
Protein GI81300287 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.611234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTC TGAGACACGT CCTGCAAACG ACTGACAGTC TCAGTCCCGC GATCGCGAGC 
GCTGTGGAAC AATCTCTTTC CAAATCGATT GAATCTCGCG CCGCTCAGAC CTTGGGCTGG
CTCCTGGCAA CTGCTGTCAT GGTTGCGATC GGCCTAGTGG TCACGCTTAT TCGTCCTGCC
GATCCCTACG TCAGCACGGT GCTAAACCTG CCGGGCAATG CTGAGCGCGG CCAGGCAATC
TTTCAAATCA ACTGTGCCGG CTGCCATGGG CCTGAAGGAC GGGGTTTGGT TGGACCGGAC
CTGGCTAATG TCTCCAATCG CAAGTCCCGC AAAGATTTGA TCCGGCAGGT AACGACTGGC
GAAACGCCTC CCATGCCTAA GTTTCAGCCC AGTCCAGAAA CCATGGCCGA CCTCTTGCGC
TACCTTGAAA CCCTGTAG
 
Protein sequence
MIILRHVLQT TDSLSPAIAS AVEQSLSKSI ESRAAQTLGW LLATAVMVAI GLVVTLIRPA 
DPYVSTVLNL PGNAERGQAI FQINCAGCHG PEGRGLVGPD LANVSNRKSR KDLIRQVTTG
ETPPMPKFQP SPETMADLLR YLETL