Gene Synpcc7942_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1474 
Symbol 
ID3773646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1525078 
End bp1525413 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content43% 
IMG OID637799906 
Productputative monovalent cation/H+ antiporter subunit C 
Protein accessionYP_400491 
Protein GI81300283 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.273986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGAGG GCTTGATTCT AGCAACACTA CTGATTGGAT TTTTTGGGAC TCTATTCAAG 
AAAAATCTGA TCATGAAAGT CATTGCAATG GATGTGATGA GTACTGGTGT AATCACGTAT
TACGTCGTTG TTGCAGCCAG GGAAGGGCTC TTCACACCAA TTTTGATCAC CGATCAGAAT
CAAGCCTATG CCGATCCCGT TCCCCAGGCA GTCATCCTAA CAGCAATCGT GATTGGCTTT
TCAGTTCAAG CACTGATTTT AGTTGGGATC ATGAAGCTAT CGAGGAATAA TCCCACCTTA
GAAATCAGTG AAGTTGAGCG CAGCAATACG CAATGA
 
Protein sequence
MIEGLILATL LIGFFGTLFK KNLIMKVIAM DVMSTGVITY YVVVAAREGL FTPILITDQN 
QAYADPVPQA VILTAIVIGF SVQALILVGI MKLSRNNPTL EISEVERSNT Q