Gene Synpcc7942_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1463 
Symbol 
ID3773635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1515369 
End bp1517000 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content53% 
IMG OID637799895 
Productporin 
Protein accessionYP_400480 
Protein GI81300272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000578184 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0560138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTAC CTGCAGCCCT TTGGATGGGA ACAGGACTTT GGTTGGGGCT AGCACCAGCC 
ACGATCGCCT TTGACGCCAG CACAATCCGA CAGGTGAATG CGATCGCCAA TGAAGATTTA
CCCGCAGCCC AAGTCACTTC AATCACCCAA CTGAGTGACG TTCGCCCGAC TGATTGGGCC
TATCAAGCAC TGCAGTCCTT GGTTGAACGC TACGGCTGCA TCGTTGGTTA TCCCGATCGT
ACCTACCGTG GCAGCCGCGC CCTGACTCGC TACGAATTCG CTGCTGGTCT GAACGCTTGT
TTGGACAAAG TCATTGAATT TGCAGCTTCA AAAGAGGATC TCGACACCCT CAAGAAGCTG
ATGGAAGAGT TCCAAGCTGA ACTCGCAACC CTGCGCGGCC GGGTCGACAG CCTCGAAGCT
CGTGTGACCG AACTGGAAGC AACTCAGTTT TCCACCACCA CCAAGCTACA AGGCGAAGTA
ATCCTGAGCT TGGATCGGGC TTTTGGCCCC AGCGGTCTCG ACACCGGTAC CTCCTTCTCG
CAACGGGTTA GTCTCAACCT CAATACCAGT TTCACTGGTA AAGATTTGCT GAAAACGCGT
CTGCGTTCCA ACAGCATCAC CTCTCCTGGC CTACGGGACT TCAATGGTGG CGTGCCTGGC
TCAGGCATCA TCAGCCCTGC TGCTGCCCTC GATTACGACA ACGCCACCAA CGCACCTAAC
GCTAATTTCT TCCTAGACAC GTTGCTCTAC ACCTTCCCCG TGGGCGATGT GAAATTTACT
GTGGGTACTT CTAACCTGCA GGTTGAAGAC ATTCTGTCGA CGACTGGCAC GTTCTACGCA
CCCTACATCA GCTACTTCTT CAGTACTCCG ATCCCGGGTA TCTATGGTGA TGCTGATACC
ACCAACTCTG CTGGTGCTGG TTTCAACTGG CAACTAAGCA AAAACTTTAA CTTTGGTGCT
GCCTACATCA ACCAAAATGG TCCGACCACA GGTGGTAACC TCGCCAGTGA CCCGACTTCG
GGTGTGTTCG GTGCTGACTC TCAAACTACG GCTCAGTTAG CGTTCAAAAA CGACAGTGGT
ACTTTCATCG GTGCCCTGGC CTACGCTTAC CGGAAAGGTC CTGACCTTGC AACCGATTTG
AGCTTCTTGC CTAGCCAGTT TGGTGGTGTT AACTTCGGTA CTCCTCGTGC TTTGGCTGGT
CTTGGCTTAG GTAGCTCCGG CTCAGACATC GTCAGCACCA ACAATATTGG TTTGTCCTTG
GGCTGGGCAG TGAGCGATGG CTTCACCATC AGCGGTTCCT ATGGCATCAG CTTCGGCAAC
GGTTTTGGTG CTAACAACAC AGTTCAGTCT TGGACGGTAG GCTTCACCTT CCCGAACCTC
TTCGCTGATG GCAACGAGTT CGGCTTCGCA GTGGGTCAAG CACCCTACGT GATCAGTGAT
AGCCGGGGCG CTGCTTTCCA AGACAGCGGT AACTTCGCTT TTGAGGTCTA CTACAAGCTG
CAAGTGACTG ACAACATCTC GATCACTCCT GCTCTCTACG CCATCACCAA TGCTGGCGGT
GGTCTGAGCT TCCCCGATTC GGCTAATGGT GACTTCATCG TCCCCGTGAT CAAAACCGTG
TTTACTTTCT AG
 
Protein sequence
MHVPAALWMG TGLWLGLAPA TIAFDASTIR QVNAIANEDL PAAQVTSITQ LSDVRPTDWA 
YQALQSLVER YGCIVGYPDR TYRGSRALTR YEFAAGLNAC LDKVIEFAAS KEDLDTLKKL
MEEFQAELAT LRGRVDSLEA RVTELEATQF STTTKLQGEV ILSLDRAFGP SGLDTGTSFS
QRVSLNLNTS FTGKDLLKTR LRSNSITSPG LRDFNGGVPG SGIISPAAAL DYDNATNAPN
ANFFLDTLLY TFPVGDVKFT VGTSNLQVED ILSTTGTFYA PYISYFFSTP IPGIYGDADT
TNSAGAGFNW QLSKNFNFGA AYINQNGPTT GGNLASDPTS GVFGADSQTT AQLAFKNDSG
TFIGALAYAY RKGPDLATDL SFLPSQFGGV NFGTPRALAG LGLGSSGSDI VSTNNIGLSL
GWAVSDGFTI SGSYGISFGN GFGANNTVQS WTVGFTFPNL FADGNEFGFA VGQAPYVISD
SRGAAFQDSG NFAFEVYYKL QVTDNISITP ALYAITNAGG GLSFPDSANG DFIVPVIKTV
FTF