Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1463 |
Symbol | |
ID | 3773635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1515369 |
End bp | 1517000 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637799895 |
Product | porin |
Protein accession | YP_400480 |
Protein GI | 81300272 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000578184 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0560138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTAC CTGCAGCCCT TTGGATGGGA ACAGGACTTT GGTTGGGGCT AGCACCAGCC ACGATCGCCT TTGACGCCAG CACAATCCGA CAGGTGAATG CGATCGCCAA TGAAGATTTA CCCGCAGCCC AAGTCACTTC AATCACCCAA CTGAGTGACG TTCGCCCGAC TGATTGGGCC TATCAAGCAC TGCAGTCCTT GGTTGAACGC TACGGCTGCA TCGTTGGTTA TCCCGATCGT ACCTACCGTG GCAGCCGCGC CCTGACTCGC TACGAATTCG CTGCTGGTCT GAACGCTTGT TTGGACAAAG TCATTGAATT TGCAGCTTCA AAAGAGGATC TCGACACCCT CAAGAAGCTG ATGGAAGAGT TCCAAGCTGA ACTCGCAACC CTGCGCGGCC GGGTCGACAG CCTCGAAGCT CGTGTGACCG AACTGGAAGC AACTCAGTTT TCCACCACCA CCAAGCTACA AGGCGAAGTA ATCCTGAGCT TGGATCGGGC TTTTGGCCCC AGCGGTCTCG ACACCGGTAC CTCCTTCTCG CAACGGGTTA GTCTCAACCT CAATACCAGT TTCACTGGTA AAGATTTGCT GAAAACGCGT CTGCGTTCCA ACAGCATCAC CTCTCCTGGC CTACGGGACT TCAATGGTGG CGTGCCTGGC TCAGGCATCA TCAGCCCTGC TGCTGCCCTC GATTACGACA ACGCCACCAA CGCACCTAAC GCTAATTTCT TCCTAGACAC GTTGCTCTAC ACCTTCCCCG TGGGCGATGT GAAATTTACT GTGGGTACTT CTAACCTGCA GGTTGAAGAC ATTCTGTCGA CGACTGGCAC GTTCTACGCA CCCTACATCA GCTACTTCTT CAGTACTCCG ATCCCGGGTA TCTATGGTGA TGCTGATACC ACCAACTCTG CTGGTGCTGG TTTCAACTGG CAACTAAGCA AAAACTTTAA CTTTGGTGCT GCCTACATCA ACCAAAATGG TCCGACCACA GGTGGTAACC TCGCCAGTGA CCCGACTTCG GGTGTGTTCG GTGCTGACTC TCAAACTACG GCTCAGTTAG CGTTCAAAAA CGACAGTGGT ACTTTCATCG GTGCCCTGGC CTACGCTTAC CGGAAAGGTC CTGACCTTGC AACCGATTTG AGCTTCTTGC CTAGCCAGTT TGGTGGTGTT AACTTCGGTA CTCCTCGTGC TTTGGCTGGT CTTGGCTTAG GTAGCTCCGG CTCAGACATC GTCAGCACCA ACAATATTGG TTTGTCCTTG GGCTGGGCAG TGAGCGATGG CTTCACCATC AGCGGTTCCT ATGGCATCAG CTTCGGCAAC GGTTTTGGTG CTAACAACAC AGTTCAGTCT TGGACGGTAG GCTTCACCTT CCCGAACCTC TTCGCTGATG GCAACGAGTT CGGCTTCGCA GTGGGTCAAG CACCCTACGT GATCAGTGAT AGCCGGGGCG CTGCTTTCCA AGACAGCGGT AACTTCGCTT TTGAGGTCTA CTACAAGCTG CAAGTGACTG ACAACATCTC GATCACTCCT GCTCTCTACG CCATCACCAA TGCTGGCGGT GGTCTGAGCT TCCCCGATTC GGCTAATGGT GACTTCATCG TCCCCGTGAT CAAAACCGTG TTTACTTTCT AG
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Protein sequence | MHVPAALWMG TGLWLGLAPA TIAFDASTIR QVNAIANEDL PAAQVTSITQ LSDVRPTDWA YQALQSLVER YGCIVGYPDR TYRGSRALTR YEFAAGLNAC LDKVIEFAAS KEDLDTLKKL MEEFQAELAT LRGRVDSLEA RVTELEATQF STTTKLQGEV ILSLDRAFGP SGLDTGTSFS QRVSLNLNTS FTGKDLLKTR LRSNSITSPG LRDFNGGVPG SGIISPAAAL DYDNATNAPN ANFFLDTLLY TFPVGDVKFT VGTSNLQVED ILSTTGTFYA PYISYFFSTP IPGIYGDADT TNSAGAGFNW QLSKNFNFGA AYINQNGPTT GGNLASDPTS GVFGADSQTT AQLAFKNDSG TFIGALAYAY RKGPDLATDL SFLPSQFGGV NFGTPRALAG LGLGSSGSDI VSTNNIGLSL GWAVSDGFTI SGSYGISFGN GFGANNTVQS WTVGFTFPNL FADGNEFGFA VGQAPYVISD SRGAAFQDSG NFAFEVYYKL QVTDNISITP ALYAITNAGG GLSFPDSANG DFIVPVIKTV FTF
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