Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1458 |
Symbol | |
ID | 3773630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1510962 |
End bp | 1511528 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799890 |
Product | hypothetical protein |
Protein accession | YP_400475 |
Protein GI | 81300267 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0910474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0228469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATCGTC TGATACCGAT CACCCTTTTG CTCAGCCTAG GTGTGGTCTG GGGACTCAAC CGAGTTGCTG TCGCCCAGCG ATCGCCCCAG GCGATCTTTG TTTTGGGTGG CGATCCGCAG CGGGAGCAAT TTGCAGCTGA GCTGGCCCAA ACTCACCCCG ATCTACCGAT TTGGGTGTCC TCGGGCTCCA ATCCTGAATA TGCCGAATGG GTGTTTAGTC AAGCAGGCGT CCCTCGGTCA CGCCTACATT TGGACTACCA GGCCACCGAC ACCCTCAGCA ACTTCACCAG CTTGGCCGAT CGCTTTCAGC AGCAGGGCAT CCAGCACGTC TACCTCGTGA CCTCGGACTA TCACATGCGC CGCGCTTTAG TGATCGCCAA TATTGTCTTT GCTAGCCGGG GCATCACGTT TGAGCCAGTT CCTGTCCCCT CCGACAGGGC TTCCGAGTCT TGGCGCAAAG CCATCCGCGA TGGGGGACGG GCGATTATTT GGGTGCTACT TGGCCCCGAA GCAGAACTCT GGCTCAGCAA GGCTTGGCCG CAAGTGCTAG CGACCCAGAC TGTGTAA
|
Protein sequence | MHRLIPITLL LSLGVVWGLN RVAVAQRSPQ AIFVLGGDPQ REQFAAELAQ THPDLPIWVS SGSNPEYAEW VFSQAGVPRS RLHLDYQATD TLSNFTSLAD RFQQQGIQHV YLVTSDYHMR RALVIANIVF ASRGITFEPV PVPSDRASES WRKAIRDGGR AIIWVLLGPE AELWLSKAWP QVLATQTV
|
| |