Gene Synpcc7942_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1458 
Symbol 
ID3773630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1510962 
End bp1511528 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content58% 
IMG OID637799890 
Producthypothetical protein 
Protein accessionYP_400475 
Protein GI81300267 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0910474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0228469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGTC TGATACCGAT CACCCTTTTG CTCAGCCTAG GTGTGGTCTG GGGACTCAAC 
CGAGTTGCTG TCGCCCAGCG ATCGCCCCAG GCGATCTTTG TTTTGGGTGG CGATCCGCAG
CGGGAGCAAT TTGCAGCTGA GCTGGCCCAA ACTCACCCCG ATCTACCGAT TTGGGTGTCC
TCGGGCTCCA ATCCTGAATA TGCCGAATGG GTGTTTAGTC AAGCAGGCGT CCCTCGGTCA
CGCCTACATT TGGACTACCA GGCCACCGAC ACCCTCAGCA ACTTCACCAG CTTGGCCGAT
CGCTTTCAGC AGCAGGGCAT CCAGCACGTC TACCTCGTGA CCTCGGACTA TCACATGCGC
CGCGCTTTAG TGATCGCCAA TATTGTCTTT GCTAGCCGGG GCATCACGTT TGAGCCAGTT
CCTGTCCCCT CCGACAGGGC TTCCGAGTCT TGGCGCAAAG CCATCCGCGA TGGGGGACGG
GCGATTATTT GGGTGCTACT TGGCCCCGAA GCAGAACTCT GGCTCAGCAA GGCTTGGCCG
CAAGTGCTAG CGACCCAGAC TGTGTAA
 
Protein sequence
MHRLIPITLL LSLGVVWGLN RVAVAQRSPQ AIFVLGGDPQ REQFAAELAQ THPDLPIWVS 
SGSNPEYAEW VFSQAGVPRS RLHLDYQATD TLSNFTSLAD RFQQQGIQHV YLVTSDYHMR
RALVIANIVF ASRGITFEPV PVPSDRASES WRKAIRDGGR AIIWVLLGPE AELWLSKAWP
QVLATQTV