Gene Synpcc7942_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1456 
Symbol 
ID3773628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1509455 
End bp1510336 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content58% 
IMG OID637799888 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_400473 
Protein GI81300265 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.40678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0451316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA CGGTGTGGGT GTTTCCGGGG CAAGGATCTC AGGCAACGGG AATGGGCGTT 
GACCTGCAGG ATTGGCCAGA AGCTCAACAG CGTTTGGCCG AAGCTGAGGC GCTTCTCGGA
TGGTCGGTGC TGGAGCGCTG CCAAGCCGAT TTAGAAACGC TGTCGCAGAC GATTAACACG
CAGCCCTGTC TCTACGTGCT GGAGGCGATT CTGAGTGATC GCTTGAAGCA ACAGGGTGAG
CAGCCTGATG CTGTCGCTGG CCACAGCCTT GGCGAATATT CAGCCCTCTA CACCGCAGGT
GTCTTTAACT TCGCGACGGG GCTGCAACTG GTTCAGAAAC GGGCAGAACT GATGCAGGCC
GCTTCCGGTG GCAAGATGGC CGCTCTAATT GGCTTTGATG CTGAGGCACT AGCGGCAGCG
ATCGCCAACA CCGAAGGCGT AGTGCTCGCC AATGACAATA GCGCCGCCCA AGTTGTGATT
TCTGGAACTC CAGCAGCGGT CGACGCGATC TTGGCAGCCG TCAAGAGTAA ACGGGCTGTC
CCCCTGACAG TCTCCGGGGC ATTCCACTCG CCGTTTATGG CTGAGGCGGC AACGACGTTT
GCGGCCACCC TGGCAGCAGT GGATTTTCAG GATGCGCAGG TCCCTGTGCT TTCAAATGTC
AGCGCGACTC CTAGCACCGA TGCTGCTGTG CTCAAGCAAA ACCTGTTGCA ACAGATGACA
GGCTCGGTGC GCTGGCGCGA AACCTGTCTG GCGATCGAAG CCCTGGGCGT TGAAGAACTG
GTTGAAGTTG GTCCCGGTAA AGTCCTGACG GGCTTGATGA AACGGACTTG TCCTGCAATC
GGATTGCGCA ATGTTGGAAC AGCAGCAGAC CTCACGGTCT AA
 
Protein sequence
MAKTVWVFPG QGSQATGMGV DLQDWPEAQQ RLAEAEALLG WSVLERCQAD LETLSQTINT 
QPCLYVLEAI LSDRLKQQGE QPDAVAGHSL GEYSALYTAG VFNFATGLQL VQKRAELMQA
ASGGKMAALI GFDAEALAAA IANTEGVVLA NDNSAAQVVI SGTPAAVDAI LAAVKSKRAV
PLTVSGAFHS PFMAEAATTF AATLAAVDFQ DAQVPVLSNV SATPSTDAAV LKQNLLQQMT
GSVRWRETCL AIEALGVEEL VEVGPGKVLT GLMKRTCPAI GLRNVGTAAD LTV