Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1451 |
Symbol | |
ID | 3773623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1504300 |
End bp | 1504761 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799883 |
Product | hypothetical protein |
Protein accession | YP_400468 |
Protein GI | 81300260 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00694087 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAATCT GGCGATCGCT CAGTCTCTTG CTCGTACTGA TTGGCGGTCT GATTTTCGGC GCGGGCCCAG CGTTGGCTAT CACTCAGCTC AATGTCACCA CCGTTGACTA TCAACAGTGC CCGGCTGAAC TCAATTCAGG AGCTGTCACC AGTGGCGGTA GTAGTCGCCC AGCCACCTGC TACTTGGTGG TGGGCACGCT CAACAACCCC AGCAACAAAA CCGTCTACGA CGTCGATATC TACGGTCGGG TCTACGACGC GAACGGCGAC TCAGTGATGC AAAATCGCAC GCGCTTAGGT GAGGTTGAGG AAGTGCCGCC GGGCGATCAT CCTTTCGAAA TTCGGATCAG CGTTCCGGCC AGCCAACCAG AACCACTGCA ACTTAAGCAA TTCAAAGCAT CGGGCTTCAG CGCCACGGTC CGGACCCAAC TGCTAGAAGA ACCGGCTGAA TCTCGTTTCT AA
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Protein sequence | MKIWRSLSLL LVLIGGLIFG AGPALAITQL NVTTVDYQQC PAELNSGAVT SGGSSRPATC YLVVGTLNNP SNKTVYDVDI YGRVYDANGD SVMQNRTRLG EVEEVPPGDH PFEIRISVPA SQPEPLQLKQ FKASGFSATV RTQLLEEPAE SRF
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