Gene Synpcc7942_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1449 
SymbollpxD 
ID3773621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand- 
Start bp1502325 
End bp1503392 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content59% 
IMG OID637799881 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_400466 
Protein GI81300258 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.068094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGA GTGAGTTTCT GCAACACCTG GAGGCCAAAA CTGGCCCCTG TACCGCCAAG 
GCGATCGCAG GCGATCCAGA ACTACACGGA GTCGCGGCCA TCAACGAGGC GCAATCAGGA 
CAGGTGAGCT TTCTCGATCA GGAGAGCGGC CTACAGGACT GGATTGAGCA AACAGCGGCC 
AGTGCTTTGA TCTTGCCACC GGATCCAGCC TTACAGGCCC GTGCTGAGGC TCGCAATCTC 
CCTTGGATGA CGACAGCTCA GCCACGCTTG GCGTTTGCTG CTGCGATCGC AGTCTTTTAT 
CAACCCTTTC GGCCGGTAGC GGGCATTCAT CCCAGCGCCG TTATTGATCC CAGCGCCCAG 
TTGGGCGATC GCGTCAGTGT CGGTGCCCAT GTGGTGATTG GCGCGAACTG CGTGATCGGC 
AATGACGTCA TCCTGCATGC CAATGTTGTC CTCTATCCCG GCGTCAGCCT CGGCGATCGC 
TGCCAGATCC ATGCCAACAG CACGATTCAT GAGCGCAGCC AAATCGGGCA AGACTGCGTG 
ATCCACAGCG GTGCAGTCAT CGGAGCAGAA GGCTTTGGCT TTGTGCCCAC CGCCAGCGGC 
TGGTTCAAGA TGGAGCAGTC CGGCATCGTT GTGCTGGAAG ATGGCGTTGA AGTCGGGTGC 
AACAGTGCGA TCGATCGCCC TGCAGTTGGC GAAACTCGGA TTGGTGCTCA AACCAAGCTC 
GATAACCTTG TCCATATTGG CCATGGCTGC CAGATTGGCA AAGCCTGCGC TATGGCAGCC 
CAAGTCGGCC TCGCTGGGGG AGTGGAAGTC GGTGACCGCG TCATTCTGGC GGGACAGGTG 
GGCGTTGCTA ACCGCGTCAA GATTGGCGAT CGCGCGATCG CATCCTCAAA ATCCGGCATC 
CACGGTGAAA TCGAAGCAGG GGCGATTGTT TCGGGCTATC CAGCCATCCC CAATCGGCAA 
TGGCTTAAAA CCTCAGCTGT CTACAATCGC TTGCCTGAGC TCTACCGCAG CCTCCGCAAC 
CTAATACGGC GCGTGGAAGT GCTGGAACAG GATCGCCCCA GTTCCTAG
 
Protein sequence
MRWSEFLQHL EAKTGPCTAK AIAGDPELHG VAAINEAQSG QVSFLDQESG LQDWIEQTAA 
SALILPPDPA LQARAEARNL PWMTTAQPRL AFAAAIAVFY QPFRPVAGIH PSAVIDPSAQ 
LGDRVSVGAH VVIGANCVIG NDVILHANVV LYPGVSLGDR CQIHANSTIH ERSQIGQDCV 
IHSGAVIGAE GFGFVPTASG WFKMEQSGIV VLEDGVEVGC NSAIDRPAVG ETRIGAQTKL 
DNLVHIGHGC QIGKACAMAA QVGLAGGVEV GDRVILAGQV GVANRVKIGD RAIASSKSGI 
HGEIEAGAIV SGYPAIPNRQ WLKTSAVYNR LPELYRSLRN LIRRVEVLEQ DRPSS