Gene Synpcc7942_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1442 
Symbol 
ID3773614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1496399 
End bp1496833 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content56% 
IMG OID637799874 
Producthypothetical protein 
Protein accessionYP_400459 
Protein GI81300251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.305391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.437482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCATG CATCGATTCG TACCGCCGAT ATCCACCGCG CGATCGACTT CTACGAACTT 
CTAGGATTTC AGGTTTGCGA GCGATTCACC GCTGGCTACA CTTTGGCTTG CTGGATGGAA
GGTTTGGGCG GCCGCATCGA ACTCCTGCAA GTGCCCCAAC CCCGACCTGC TGCTGATGCC
TTCCACGACG AGCACTACAC CGGCTATTAC CATCTTTCTT TTGACCTAAC CGCACTGACT
CCCAATCTCA GTCAGTGGCT GGATGAATTT CAGGTCAGAC TGCAAGCTCA GGGCGAAGCA
CCCGCGCCCG TTTTACTCAC GCCACGCCAG CAGCAGATTG GCACCAGCAT CTACGAAGTG
ATGTTTCTGA GCGATCGTGA TGGGTTGCCG CTAGAGTTTC TGCGCTTCCA GACCCGTCTG
GAACCCTCTA CCTGA
 
Protein sequence
MHHASIRTAD IHRAIDFYEL LGFQVCERFT AGYTLACWME GLGGRIELLQ VPQPRPAADA 
FHDEHYTGYY HLSFDLTALT PNLSQWLDEF QVRLQAQGEA PAPVLLTPRQ QQIGTSIYEV
MFLSDRDGLP LEFLRFQTRL EPST